These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

176 related articles for article (PubMed ID: 33752373)

  • 21. Broad distributions of transition-path times are fingerprints of multidimensionality of the underlying free energy landscapes.
    Satija R; Berezhkovskii AM; Makarov DE
    Proc Natl Acad Sci U S A; 2020 Nov; 117(44):27116-27123. PubMed ID: 33087575
    [TBL] [Abstract][Full Text] [Related]  

  • 22. The Effect of Time Resolution on Apparent Transition Path Times Observed in Single-Molecule Studies of Biomolecules.
    Makarov DE; Berezhkovskii A; Haran G; Pollak E
    J Phys Chem B; 2022 Oct; 126(40):7966-7974. PubMed ID: 36194758
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Accuracy of maximum likelihood estimates of a two-state model in single-molecule FRET.
    Gopich IV
    J Chem Phys; 2015 Jan; 142(3):034110. PubMed ID: 25612692
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Transition paths, diffusive processes, and preequilibria of protein folding.
    Zhang Z; Chan HS
    Proc Natl Acad Sci U S A; 2012 Dec; 109(51):20919-24. PubMed ID: 23213246
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Microscopic interpretation of folding ϕ-values using the transition path ensemble.
    Best RB; Hummer G
    Proc Natl Acad Sci U S A; 2016 Mar; 113(12):3263-8. PubMed ID: 26957599
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Reconstructing folding energy landscapes from splitting probability analysis of single-molecule trajectories.
    Manuel AP; Lambert J; Woodside MT
    Proc Natl Acad Sci U S A; 2015 Jun; 112(23):7183-8. PubMed ID: 26039984
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Measuring ultrafast protein folding rates from photon-by-photon analysis of single molecule fluorescence trajectories.
    Chung HS; Cellmer T; Louis JM; Eaton WA
    Chem Phys; 2013 Aug; 422():229-237. PubMed ID: 24443626
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Generation of initial trajectories for transition path sampling of chemical reactions with ab initio molecular dynamics.
    Rowley CN; Woo TK
    J Chem Phys; 2007 Jan; 126(2):024110. PubMed ID: 17228946
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Direct measurement of sequence-dependent transition path times and conformational diffusion in DNA duplex formation.
    Neupane K; Wang F; Woodside MT
    Proc Natl Acad Sci U S A; 2017 Feb; 114(6):1329-1334. PubMed ID: 28115714
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Decoding the pattern of photon colors in single-molecule FRET.
    Gopich IV; Szabo A
    J Phys Chem B; 2009 Aug; 113(31):10965-73. PubMed ID: 19588948
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Communication: Transition-path velocity as an experimental measure of barrier crossing dynamics.
    Berezhkovskii AM; Makarov DE
    J Chem Phys; 2018 May; 148(20):201102. PubMed ID: 29865813
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A minimization principle for transition paths of maximum flux for collective variables.
    Skeel RD; Zhao R; Post CB
    Theor Chem Acc; 2017 Jan; 136():. PubMed ID: 29225509
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Analysis of photobleaching in single-molecule multicolor excitation and Förster resonance energy transfer measurements.
    Eggeling C; Widengren J; Brand L; Schaffer J; Felekyan S; Seidel CA
    J Phys Chem A; 2006 Mar; 110(9):2979-95. PubMed ID: 16509620
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Experimental evidence of symmetry breaking of transition-path times.
    Gladrow J; Ribezzi-Crivellari M; Ritort F; Keyser UF
    Nat Commun; 2019 Jan; 10(1):55. PubMed ID: 30610184
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Direct observation of transition paths during the folding of proteins and nucleic acids.
    Neupane K; Foster DA; Dee DR; Yu H; Wang F; Woodside MT
    Science; 2016 Apr; 352(6282):239-42. PubMed ID: 27124461
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Transition Path Times in Non-Markovian Activated Rate Processes.
    Medina E; Satija R; Makarov DE
    J Phys Chem B; 2018 Dec; 122(49):11400-11413. PubMed ID: 30179506
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Energy landscape analysis of native folding of the prion protein yields the diffusion constant, transition path time, and rates.
    Yu H; Gupta AN; Liu X; Neupane K; Brigley AM; Sosova I; Woodside MT
    Proc Natl Acad Sci U S A; 2012 Sep; 109(36):14452-7. PubMed ID: 22908253
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Single-molecule fluorescence probes dynamics of barrier crossing.
    Chung HS; Eaton WA
    Nature; 2013 Oct; 502(7473):685-8. PubMed ID: 24153185
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Shapes of dominant transition paths from single-molecule force spectroscopy.
    Makarov DE
    J Chem Phys; 2015 Nov; 143(19):194103. PubMed ID: 26590523
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.