BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

140 related articles for article (PubMed ID: 33767737)

  • 1. Embedding Analytics within the Curation of Scientific Workflows.
    Weatherby G; Gryk MR
    Int J Digit Curation; 2020; 15(1):. PubMed ID: 33767737
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Curating Scientific Workflows for Biomolecular Nuclear Magnetic Resonance Spectroscopy.
    Heintz D; Gryk MR
    Int J Digit Curation; 2018; 13(1):286-293. PubMed ID: 31061674
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Sharing interoperable workflow provenance: A review of best practices and their practical application in CWLProv.
    Khan FZ; Soiland-Reyes S; Sinnott RO; Lonie A; Goble C; Crusoe MR
    Gigascience; 2019 Nov; 8(11):. PubMed ID: 31675414
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Curation of BIDS (CuBIDS): A workflow and software package for streamlining reproducible curation of large BIDS datasets.
    Covitz S; Tapera TM; Adebimpe A; Alexander-Bloch AF; Bertolero MA; Feczko E; Franco AR; Gur RE; Gur RC; Hendrickson T; Houghton A; Mehta K; Murtha K; Perrone AJ; Robert-Fitzgerald T; Schabdach JM; Shinohara RT; Vogel JW; Zhao C; Fair DA; Milham MP; Cieslak M; Satterthwaite TD
    Neuroimage; 2022 Nov; 263():119609. PubMed ID: 36064140
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Watchdog - a workflow management system for the distributed analysis of large-scale experimental data.
    Kluge M; Friedel CC
    BMC Bioinformatics; 2018 Mar; 19(1):97. PubMed ID: 29534677
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Semantic workflows for benchmark challenges: Enhancing comparability, reusability and reproducibility.
    Srivastava A; Adusumilli R; Boyce H; Garijo D; Ratnakar V; Mayani R; Yu T; Machiraju R; Gil Y; Mallick P
    Pac Symp Biocomput; 2019; 24():208-219. PubMed ID: 30864323
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Workflow sharing with automated metadata validation and test execution to improve the reusability of published workflows.
    Suetake H; Fukusato T; Igarashi T; Ohta T
    Gigascience; 2022 Dec; 12():. PubMed ID: 36810800
    [TBL] [Abstract][Full Text] [Related]  

  • 8. OMD Curation Toolkit: a workflow for in-house curation of public omics datasets.
    Piquer-Esteban S; Arnau V; Diaz W; Moya A
    BMC Bioinformatics; 2024 May; 25(1):184. PubMed ID: 38724907
    [TBL] [Abstract][Full Text] [Related]  

  • 9. FAIRSCAPE: a Framework for FAIR and Reproducible Biomedical Analytics.
    Levinson MA; Niestroy J; Al Manir S; Fairchild K; Lake DE; Moorman JR; Clark T
    Neuroinformatics; 2022 Jan; 20(1):187-202. PubMed ID: 34264488
    [TBL] [Abstract][Full Text] [Related]  

  • 10. BioWorkbench: a high-performance framework for managing and analyzing bioinformatics experiments.
    Mondelli ML; Magalhães T; Loss G; Wilde M; Foster I; Mattoso M; Katz D; Barbosa H; de Vasconcelos ATR; Ocaña K; Gadelha LMR
    PeerJ; 2018; 6():e5551. PubMed ID: 30186700
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A multi-omics data analysis workflow packaged as a FAIR Digital Object.
    Niehues A; de Visser C; Hagenbeek FA; Kulkarni P; Pool R; Karu N; Kindt ASD; Singh G; Vermeiren RRJM; Boomsma DI; van Dongen J; 't Hoen PAC; van Gool AJ
    Gigascience; 2024 Jan; 13():. PubMed ID: 38217405
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Investigating reproducibility and tracking provenance - A genomic workflow case study.
    Kanwal S; Khan FZ; Lonie A; Sinnott RO
    BMC Bioinformatics; 2017 Jul; 18(1):337. PubMed ID: 28701218
    [TBL] [Abstract][Full Text] [Related]  

  • 13. From Raw Data to FAIR Data: The FAIRification Workflow for Health Research.
    Sinaci AA; Núñez-Benjumea FJ; Gencturk M; Jauer ML; Deserno T; Chronaki C; Cangioli G; Cavero-Barca C; Rodríguez-Pérez JM; Pérez-Pérez MM; Laleci Erturkmen GB; Hernández-Pérez T; Méndez-Rodríguez E; Parra-Calderón CL
    Methods Inf Med; 2020 Jun; 59(S 01):e21-e32. PubMed ID: 32620019
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Building Containerized Workflows Using the BioDepot-Workflow-Builder.
    Hung LH; Hu J; Meiss T; Ingersoll A; Lloyd W; Kristiyanto D; Xiong Y; Sobie E; Yeung KY
    Cell Syst; 2019 Nov; 9(5):508-514.e3. PubMed ID: 31521606
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Semantic Mediation to Improve Reproducibility for Biomolecular NMR Analysis.
    Gryk MR; Ludäscher B
    Transform Digit Worlds (2018); 2018 Mar; 10766():620-625. PubMed ID: 30334020
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Perspectives on automated composition of workflows in the life sciences.
    Lamprecht AL; Palmblad M; Ison J; Schwämmle V; Al Manir MS; Altintas I; Baker CJO; Ben Hadj Amor A; Capella-Gutierrez S; Charonyktakis P; Crusoe MR; Gil Y; Goble C; Griffin TJ; Groth P; Ienasescu H; Jagtap P; Kalaš M; Kasalica V; Khanteymoori A; Kuhn T; Mei H; Ménager H; Möller S; Richardson RA; Robert V; Soiland-Reyes S; Stevens R; Szaniszlo S; Verberne S; Verhoeven A; Wolstencroft K
    F1000Res; 2021; 10():897. PubMed ID: 34804501
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories.
    Bukhari SAC; O'Connor MJ; Martínez-Romero M; Egyedi AL; Willrett D; Graybeal J; Musen MA; Rubelt F; Cheung KH; Kleinstein SH
    Front Immunol; 2018; 9():1877. PubMed ID: 30166985
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Support for Taverna workflows in the VPH-Share cloud platform.
    Kasztelnik M; Coto E; Bubak M; Malawski M; Nowakowski P; Arenas J; Saglimbeni A; Testi D; Frangi AF
    Comput Methods Programs Biomed; 2017 Jul; 146():37-46. PubMed ID: 28688488
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Agile parallel bioinformatics workflow management using Pwrake.
    Mishima H; Sasaki K; Tanaka M; Tatebe O; Yoshiura K
    BMC Res Notes; 2011 Sep; 4():331. PubMed ID: 21899774
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Provenance for distributed biomedical workflow execution.
    Madougou S; Santcroos M; Benabdelkader A; van Schaik BD; Shahand S; Korkhov V; van Kampen AH; Olabarriaga SD
    Stud Health Technol Inform; 2012; 175():91-100. PubMed ID: 22941992
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.