These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

227 related articles for article (PubMed ID: 33781308)

  • 1. Comprehensive identification of somatic nucleotide variants in human brain tissue.
    Wang Y; Bae T; Thorpe J; Sherman MA; Jones AG; Cho S; Daily K; Dou Y; Ganz J; Galor A; Lobon I; Pattni R; Rosenbluh C; Tomasi S; Tomasini L; Yang X; Zhou B; Akbarian S; Ball LL; Bizzotto S; Emery SB; Doan R; Fasching L; Jang Y; Juan D; Lizano E; Luquette LJ; Moldovan JB; Narurkar R; Oetjens MT; Rodin RE; Sekar S; Shin JH; Soriano E; Straub RE; Zhou W; Chess A; Gleeson JG; Marquès-Bonet T; Park PJ; Peters MA; Pevsner J; Walsh CA; Weinberger DR; ; Vaccarino FM; Moran JV; Urban AE; Kidd JM; Mills RE; Abyzov A
    Genome Biol; 2021 Mar; 22(1):92. PubMed ID: 33781308
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations.
    Liu Y; Loewer M; Aluru S; Schmidt B
    BMC Syst Biol; 2016 Aug; 10 Suppl 2(Suppl 2):47. PubMed ID: 27489955
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Short and long-read genome sequencing methodologies for somatic variant detection; genomic analysis of a patient with diffuse large B-cell lymphoma.
    Roberts HE; Lopopolo M; Pagnamenta AT; Sharma E; Parkes D; Lonie L; Freeman C; Knight SJL; Lunter G; Dreau H; Lockstone H; Taylor JC; Schuh A; Bowden R; Buck D
    Sci Rep; 2021 Mar; 11(1):6408. PubMed ID: 33742045
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A clinical survey of mosaic single nucleotide variants in disease-causing genes detected by exome sequencing.
    Cao Y; Tokita MJ; Chen ES; Ghosh R; Chen T; Feng Y; Gorman E; Gibellini F; Ward PA; Braxton A; Wang X; Meng L; Xiao R; Bi W; Xia F; Eng CM; Yang Y; Gambin T; Shaw C; Liu P; Stankiewicz P
    Genome Med; 2019 Jul; 11(1):48. PubMed ID: 31349857
    [TBL] [Abstract][Full Text] [Related]  

  • 5. One thousand somatic SNVs per skin fibroblast cell set baseline of mosaic mutational load with patterns that suggest proliferative origin.
    Abyzov A; Tomasini L; Zhou B; Vasmatzis N; Coppola G; Amenduni M; Pattni R; Wilson M; Gerstein M; Weissman S; Urban AE; Vaccarino FM
    Genome Res; 2017 Apr; 27(4):512-523. PubMed ID: 28235832
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Accuracy and reproducibility of somatic point mutation calling in clinical-type targeted sequencing data.
    Karimnezhad A; Palidwor GA; Thavorn K; Stewart DJ; Campbell PA; Lo B; Perkins TJ
    BMC Med Genomics; 2020 Oct; 13(1):156. PubMed ID: 33059707
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Revising a personal genome by comparing and combining data from two different sequencing platforms.
    Kim D; Kim WY; Lee SY; Lee SY; Yun H; Shin SY; Lee J; Hong Y; Won Y; Kim SJ; Lee YS; Ahn SM
    PLoS One; 2013; 8(4):e60585. PubMed ID: 23593254
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detection of Circulating Tumor DNA with a Single-Molecule Sequencing Analysis Validated for Targeted and Immunotherapy Selection.
    Atkins A; Gupta P; Zhang BM; Tsai WS; Lucas J; Javey M; Vora A; Mei R
    Mol Diagn Ther; 2019 Aug; 23(4):521-535. PubMed ID: 31209714
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Accurate detection of subclonal single nucleotide variants in whole genome amplified and pooled cancer samples using HaloPlex target enrichment.
    Berglund EC; Lindqvist CM; Hayat S; Övernäs E; Henriksson N; Nordlund J; Wahlberg P; Forestier E; Lönnerholm G; Syvänen AC
    BMC Genomics; 2013 Dec; 14(1):856. PubMed ID: 24314227
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Absence of coding somatic single nucleotide variants within well-known candidate genes in late-onset sporadic Alzheimer's Disease based on the analysis of multi-omics data.
    Min S; Li Z; Shieh A; Giase G; Bao R; Zhang C; Kuney L; Kopp R; Asif H; Alliey-Rodriguez N; Qin L; Craig DW; Faulkner GJ; Gershon ES; Tang B; Chen C; Liu C
    Neurobiol Aging; 2021 Dec; 108():207-209. PubMed ID: 34392980
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MIPP-Seq: ultra-sensitive rapid detection and validation of low-frequency mosaic mutations.
    Doan RN; Miller MB; Kim SN; Rodin RE; Ganz J; Bizzotto S; Morillo KS; Huang AY; Digumarthy R; Zemmel Z; Walsh CA
    BMC Med Genomics; 2021 Feb; 14(1):47. PubMed ID: 33579278
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Somatic Single-Nucleotide Variant Calling from Single-Cell DNA Sequencing Data Using SCAN-SNV.
    Bahonar S; Montazeri H
    Methods Mol Biol; 2022; 2493():267-277. PubMed ID: 35751821
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Single-nucleotide variant calling in single-cell sequencing data with Monopogen.
    Dou J; Tan Y; Kock KH; Wang J; Cheng X; Tan LM; Han KY; Hon CC; Park WY; Shin JW; Jin H; Wang Y; Chen H; Ding L; Prabhakar S; Navin N; Chen R; Chen K
    Nat Biotechnol; 2024 May; 42(5):803-812. PubMed ID: 37592035
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Validation of Suspected Somatic Single Nucleotide Variations in the Brain of Alzheimer's Disease Patients.
    Gomez-Ramos A; Picher AJ; García E; Garrido P; Hernandez F; Soriano E; Avila J
    J Alzheimers Dis; 2017; 56(3):977-990. PubMed ID: 28106558
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Meltos: multi-sample tumor phylogeny reconstruction for structural variants.
    Ricketts C; Seidman D; Popic V; Hormozdiari F; Batzoglou S; Hajirasouliha I
    Bioinformatics; 2020 Feb; 36(4):1082-1090. PubMed ID: 31584621
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Inconsistency and features of single nucleotide variants detected in whole exome sequencing versus transcriptome sequencing: A case study in lung cancer.
    O'Brien TD; Jia P; Xia J; Saxena U; Jin H; Vuong H; Kim P; Wang Q; Aryee MJ; Mino-Kenudson M; Engelman JA; Le LP; Iafrate AJ; Heist RS; Pao W; Zhao Z
    Methods; 2015 Jul; 83():118-27. PubMed ID: 25913717
    [TBL] [Abstract][Full Text] [Related]  

  • 17. STIC: Predicting Single Nucleotide Variants and Tumor Purity in Cancer Genome.
    Yuan X; Ma C; Zhao H; Yang L; Wang S; Xi J
    IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(6):2692-2701. PubMed ID: 32086221
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Germline contamination and leakage in whole genome somatic single nucleotide variant detection.
    Sendorek DH; Caloian C; Ellrott K; Bare JC; Yamaguchi TN; Ewing AD; Houlahan KE; Norman TC; Margolin AA; Stuart JM; Boutros PC
    BMC Bioinformatics; 2018 Jan; 19(1):28. PubMed ID: 29385983
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A new method to accurately identify single nucleotide variants using small FFPE breast samples.
    Fortunato A; Mallo D; Rupp SM; King LM; Hardman T; Lo JY; Hall A; Marks JR; Hwang ES; Maley CC
    Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34117742
    [TBL] [Abstract][Full Text] [Related]  

  • 20. High-sensitivity sequencing reveals multi-organ somatic mosaicism causing DICER1 syndrome.
    de Kock L; Wang YC; Revil T; Badescu D; Rivera B; Sabbaghian N; Wu M; Weber E; Sandoval C; Hopman SM; Merks JH; van Hagen JM; Bouts AH; Plager DA; Ramasubramanian A; Forsmark L; Doyle KL; Toler T; Callahan J; Engelenberg C; Bouron-Dal Soglio D; Priest JR; Ragoussis J; Foulkes WD
    J Med Genet; 2016 Jan; 53(1):43-52. PubMed ID: 26475046
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.