184 related articles for article (PubMed ID: 33782603)
1. Ultraconserved enhancer function does not require perfect sequence conservation.
Snetkova V; Ypsilanti AR; Akiyama JA; Mannion BJ; Plajzer-Frick I; Novak CS; Harrington AN; Pham QT; Kato M; Zhu Y; Godoy J; Meky E; Hunter RD; Shi M; Kvon EZ; Afzal V; Tran S; Rubenstein JLR; Visel A; Pennacchio LA; Dickel DE
Nat Genet; 2021 Apr; 53(4):521-528. PubMed ID: 33782603
[TBL] [Abstract][Full Text] [Related]
2. Ultraconserved Enhancers Are Required for Normal Development.
Dickel DE; Ypsilanti AR; Pla R; Zhu Y; Barozzi I; Mannion BJ; Khin YS; Fukuda-Yuzawa Y; Plajzer-Frick I; Pickle CS; Lee EA; Harrington AN; Pham QT; Garvin TH; Kato M; Osterwalder M; Akiyama JA; Afzal V; Rubenstein JLR; Pennacchio LA; Visel A
Cell; 2018 Jan; 172(3):491-499.e15. PubMed ID: 29358049
[TBL] [Abstract][Full Text] [Related]
3. Ultraconservation identifies a small subset of extremely constrained developmental enhancers.
Visel A; Prabhakar S; Akiyama JA; Shoukry M; Lewis KD; Holt A; Plajzer-Frick I; Afzal V; Rubin EM; Pennacchio LA
Nat Genet; 2008 Feb; 40(2):158-60. PubMed ID: 18176564
[TBL] [Abstract][Full Text] [Related]
4. In vivo enhancer analysis of human conserved non-coding sequences.
Pennacchio LA; Ahituv N; Moses AM; Prabhakar S; Nobrega MA; Shoukry M; Minovitsky S; Dubchak I; Holt A; Lewis KD; Plajzer-Frick I; Akiyama J; De Val S; Afzal V; Black BL; Couronne O; Eisen MB; Visel A; Rubin EM
Nature; 2006 Nov; 444(7118):499-502. PubMed ID: 17086198
[TBL] [Abstract][Full Text] [Related]
5. Perfect and imperfect views of ultraconserved sequences.
Snetkova V; Pennacchio LA; Visel A; Dickel DE
Nat Rev Genet; 2022 Mar; 23(3):182-194. PubMed ID: 34764456
[TBL] [Abstract][Full Text] [Related]
6. Conserved and non-conserved enhancers direct tissue specific transcription in ancient germ layer specific developmental control genes.
Chatterjee S; Bourque G; Lufkin T
BMC Dev Biol; 2011 Oct; 11():63. PubMed ID: 22011226
[TBL] [Abstract][Full Text] [Related]
7. Promiscuity of enhancer, coding and non-coding transcription functions in ultraconserved elements.
Licastro D; Gennarino VA; Petrera F; Sanges R; Banfi S; Stupka E
BMC Genomics; 2010 Mar; 11():151. PubMed ID: 20202189
[TBL] [Abstract][Full Text] [Related]
8. Deep conservation of the enhancer regulatory code in animals.
Wong ES; Zheng D; Tan SZ; Bower NL; Garside V; Vanwalleghem G; Gaiti F; Scott E; Hogan BM; Kikuchi K; McGlinn E; Francois M; Degnan BM
Science; 2020 Nov; 370(6517):. PubMed ID: 33154111
[TBL] [Abstract][Full Text] [Related]
9. Ultraconserved Sequences Associated with HoxD Cluster Have Strong Repression Activity.
Kushawah G; Mishra RK
Genome Biol Evol; 2017 Aug; 9(8):2049-2054. PubMed ID: 28859354
[TBL] [Abstract][Full Text] [Related]
10. The activation and maintenance of Pax2 expression at the mid-hindbrain boundary is controlled by separate enhancers.
Pfeffer PL; Payer B; Reim G; di Magliano MP; Busslinger M
Development; 2002 Jan; 129(2):307-18. PubMed ID: 11807024
[TBL] [Abstract][Full Text] [Related]
11. In vivo characterization of a vertebrate ultraconserved enhancer.
Poulin F; Nobrega MA; Plajzer-Frick I; Holt A; Afzal V; Rubin EM; Pennacchio LA
Genomics; 2005 Jun; 85(6):774-81. PubMed ID: 15885503
[TBL] [Abstract][Full Text] [Related]
12. Enhancer-gene maps in the human and zebrafish genomes using evolutionary linkage conservation.
Clément Y; Torbey P; Gilardi-Hebenstreit P; Roest Crollius H
Nucleic Acids Res; 2020 Mar; 48(5):2357-2371. PubMed ID: 31943068
[TBL] [Abstract][Full Text] [Related]
13. ChIP-Seq identification of weakly conserved heart enhancers.
Blow MJ; McCulley DJ; Li Z; Zhang T; Akiyama JA; Holt A; Plajzer-Frick I; Shoukry M; Wright C; Chen F; Afzal V; Bristow J; Ren B; Black BL; Rubin EM; Visel A; Pennacchio LA
Nat Genet; 2010 Sep; 42(9):806-10. PubMed ID: 20729851
[TBL] [Abstract][Full Text] [Related]
14. Functional analysis of limb transcriptional enhancers in the mouse.
Nolte MJ; Wang Y; Deng JM; Swinton PG; Wei C; Guindani M; Schwartz RJ; Behringer RR
Evol Dev; 2014; 16(4):207-23. PubMed ID: 24920384
[TBL] [Abstract][Full Text] [Related]
15. Synthetic enhancer design by in silico compensatory evolution reveals flexibility and constraint in cis-regulation.
Barr KA; Martinez C; Moran JR; Kim AR; Ramos AF; Reinitz J
BMC Syst Biol; 2017 Nov; 11(1):116. PubMed ID: 29187214
[TBL] [Abstract][Full Text] [Related]
16. A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts.
de la Calle-Mustienes E; Feijóo CG; Manzanares M; Tena JJ; Rodríguez-Seguel E; Letizia A; Allende ML; Gómez-Skarmeta JL
Genome Res; 2005 Aug; 15(8):1061-72. PubMed ID: 16024824
[TBL] [Abstract][Full Text] [Related]
17. Sequence conservation and combinatorial complexity of Drosophila neural precursor cell enhancers.
Brody T; Rasband W; Baler K; Kuzin A; Kundu M; Odenwald WF
BMC Genomics; 2008 Aug; 9():371. PubMed ID: 18673565
[TBL] [Abstract][Full Text] [Related]
18. Regulation of Six1 expression by evolutionarily conserved enhancers in tetrapods.
Sato S; Ikeda K; Shioi G; Nakao K; Yajima H; Kawakami K
Dev Biol; 2012 Aug; 368(1):95-108. PubMed ID: 22659139
[TBL] [Abstract][Full Text] [Related]
19. Krox20 hindbrain cis-regulatory landscape: interplay between multiple long-range initiation and autoregulatory elements.
Chomette D; Frain M; Cereghini S; Charnay P; Ghislain J
Development; 2006 Apr; 133(7):1253-62. PubMed ID: 16495311
[TBL] [Abstract][Full Text] [Related]
20. Molecular dissection of cis-regulatory modules at the Drosophila bithorax complex reveals critical transcription factor signature motifs.
Starr MO; Ho MC; Gunther EJ; Tu YK; Shur AS; Goetz SE; Borok MJ; Kang V; Drewell RA
Dev Biol; 2011 Nov; 359(2):290-302. PubMed ID: 21821017
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
