These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

201 related articles for article (PubMed ID: 33794153)

  • 1. Cation competition and recruitment around the c-kit1 G-quadruplex using polarizable simulations.
    Salsbury AM; Lemkul JA
    Biophys J; 2021 Jun; 120(11):2249-2261. PubMed ID: 33794153
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Polarizable Molecular Dynamics Simulations of Two
    Salsbury AM; Dean TJ; Lemkul JA
    J Chem Theory Comput; 2020 May; 16(5):3430-3444. PubMed ID: 32307997
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Molecular Dynamics Simulations of the c-kit1 Promoter G-Quadruplex: Importance of Electronic Polarization on Stability and Cooperative Ion Binding.
    Salsbury AM; Lemkul JA
    J Phys Chem B; 2019 Jan; 123(1):148-159. PubMed ID: 30525627
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Same fold, different properties: polarizable molecular dynamics simulations of telomeric and TERRA G-quadruplexes.
    Lemkul JA
    Nucleic Acids Res; 2020 Jan; 48(2):561-575. PubMed ID: 31807754
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Ion Binding Properties and Dynamics of the
    Ratnasinghe BD; Salsbury AM; Lemkul JA
    J Chem Inf Model; 2020 Dec; 60(12):6476-6488. PubMed ID: 33264004
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Effect of Monovalent Ion Parameters on Molecular Dynamics Simulations of G-Quadruplexes.
    Havrila M; Stadlbauer P; Islam B; Otyepka M; Šponer J
    J Chem Theory Comput; 2017 Aug; 13(8):3911-3926. PubMed ID: 28657760
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Dynamics and Barrier of Movements of Sodium and Potassium Ions Across the
    Balasubramanian S; Senapati S
    J Phys Chem B; 2020 Dec; 124(49):11055-11066. PubMed ID: 33238706
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ion-Dependent Conformational Plasticity of Telomeric G-Hairpins and G-Quadruplexes.
    Salsbury AM; Michel HM; Lemkul JA
    ACS Omega; 2022 Jul; 7(27):23368-23379. PubMed ID: 35847338
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Differences in Conformational Sampling and Intrinsic Electric Fields Drive Ion Binding in Telomeric and TERRA G-Quadruplexes.
    Polêto MD; Lemkul JA
    J Chem Inf Model; 2023 Nov; 63(21):6851-6862. PubMed ID: 37847037
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Channeling through Two Stacked Guanine Quartets of One and Two Alkali Cations in the Li
    Gresh N; Naseem-Khan S; Lagardère L; Piquemal JP; Sponer JE; Sponer J
    J Phys Chem B; 2017 Apr; 121(16):3997-4014. PubMed ID: 28363025
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural Insights into the Antiparallel G-Quadruplex in the Presence of K
    Bali SD; Ahsan M; Revanasiddappa PD
    J Phys Chem B; 2023 Feb; 127(7):1499-1512. PubMed ID: 36757392
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Divalent cation-aided identification of physico-chemical properties of metal ions that stabilize RNA G-quadruplexes.
    Balaratnam S; Basu S
    Biopolymers; 2015 Jul; 103(7):376-86. PubMed ID: 25807937
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Differences in Conformational Sampling and Intrinsic Electric Fields Drive Ion Binding in Telomeric and TERRA G-Quadruplexes.
    Polêto MD; Lemkul JA
    bioRxiv; 2023 Aug; ():. PubMed ID: 37645825
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Stability of Two-Quartet G-Quadruplexes and Their Dimers in Atomistic Simulations.
    Islam B; Stadlbauer P; Vorlíčková M; Mergny JL; Otyepka M; Šponer J
    J Chem Theory Comput; 2020 Jun; 16(6):3447-3463. PubMed ID: 32163706
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Folding of guanine quadruplex molecules-funnel-like mechanism or kinetic partitioning? An overview from MD simulation studies.
    Šponer J; Bussi G; Stadlbauer P; Kührová P; Banáš P; Islam B; Haider S; Neidle S; Otyepka M
    Biochim Biophys Acta Gen Subj; 2017 May; 1861(5 Pt B):1246-1263. PubMed ID: 27979677
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Origin of Ion Specificity of Telomeric DNA G-Quadruplexes Investigated by Free-Energy Simulations.
    Siebenmorgen T; Zacharias M
    Biophys J; 2017 Jun; 112(11):2280-2290. PubMed ID: 28591601
    [TBL] [Abstract][Full Text] [Related]  

  • 17. G-quadruplex dynamics.
    Harkness RW; Mittermaier AK
    Biochim Biophys Acta Proteins Proteom; 2017 Nov; 1865(11 Pt B):1544-1554. PubMed ID: 28642152
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Solution structures of all parallel-stranded monomeric and dimeric G-quadruplex scaffolds of the human c-kit2 promoter.
    Kuryavyi V; Phan AT; Patel DJ
    Nucleic Acids Res; 2010 Oct; 38(19):6757-73. PubMed ID: 20566478
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Homopurine guanine-rich sequences in complex with N-methyl mesoporphyrin IX form parallel G-quadruplex dimers and display a unique symmetry tetrad.
    Ye M; Chen EV; Pfeil SH; Martin KN; Atrafi T; Yun S; Martinez Z; Yatsunyk LA
    Bioorg Med Chem; 2023 Jan; 77():117112. PubMed ID: 36508994
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Benzothiazole hydrazones of furylbenzamides preferentially stabilize c-MYC and c-KIT1 promoter G-quadruplex DNAs.
    Pany SP; Bommisetti P; Diveshkumar KV; Pradeepkumar PI
    Org Biomol Chem; 2016 Jun; 14(24):5779-93. PubMed ID: 27021281
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.