207 related articles for article (PubMed ID: 33811446)
21. Understudied, underrepresented, and unknown: Methodological biases that limit detection of early diverging fungi from environmental samples.
Reynolds NK; Jusino MA; Stajich JE; Smith ME
Mol Ecol Resour; 2022 Apr; 22(3):1065-1085. PubMed ID: 34695878
[TBL] [Abstract][Full Text] [Related]
22. Introducing ribosomal tandem repeat barcoding for fungi.
Wurzbacher C; Larsson E; Bengtsson-Palme J; Van den Wyngaert S; Svantesson S; Kristiansson E; Kagami M; Nilsson RH
Mol Ecol Resour; 2019 Jan; 19(1):118-127. PubMed ID: 30240145
[TBL] [Abstract][Full Text] [Related]
23. A new fungal large subunit ribosomal RNA primer for high-throughput sequencing surveys.
Mueller RC; Gallegos-Graves LV; Kuske CR
FEMS Microbiol Ecol; 2016 Feb; 92(2):. PubMed ID: 26656064
[TBL] [Abstract][Full Text] [Related]
24. ITS1 versus ITS2 as DNA metabarcodes for fungi.
Blaalid R; Kumar S; Nilsson RH; Abarenkov K; Kirk PM; Kauserud H
Mol Ecol Resour; 2013 Mar; 13(2):218-24. PubMed ID: 23350562
[TBL] [Abstract][Full Text] [Related]
25. Distinct community structures of soil nematodes from three ecologically different sites revealed by high-throughput amplicon sequencing of four 18S ribosomal RNA gene regions.
Kenmotsu H; Ishikawa M; Nitta T; Hirose Y; Eki T
PLoS One; 2021; 16(4):e0249571. PubMed ID: 33857177
[TBL] [Abstract][Full Text] [Related]
26. Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere.
Urbina H; Breed MF; Zhao W; Lakshmi Gurrala K; Andersson SGE; Ågren J; Baldauf S; Rosling A
Fungal Biol; 2018 Apr; 122(4):231-240. PubMed ID: 29551197
[TBL] [Abstract][Full Text] [Related]
27. Organic mulching positively regulates the soil microbial communities and ecosystem functions in tea plantation.
Zhang S; Wang Y; Sun L; Qiu C; Ding Y; Gu H; Wang L; Wang Z; Ding Z
BMC Microbiol; 2020 Apr; 20(1):103. PubMed ID: 32349665
[TBL] [Abstract][Full Text] [Related]
28. ITS all right mama: investigating the formation of chimeric sequences in the ITS2 region by DNA metabarcoding analyses of fungal mock communities of different complexities.
Bjørnsgaard Aas A; Davey ML; Kauserud H
Mol Ecol Resour; 2017 Jul; 17(4):730-741. PubMed ID: 27775220
[TBL] [Abstract][Full Text] [Related]
29. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.
Fouquier J; Rideout JR; Bolyen E; Chase J; Shiffer A; McDonald D; Knight R; Caporaso JG; Kelley ST
Microbiome; 2016 Feb; 4():11. PubMed ID: 26905735
[TBL] [Abstract][Full Text] [Related]
30. Inferring Species Compositions of Complex Fungal Communities from Long- and Short-Read Sequence Data.
Hu Y; Irinyi L; Hoang MTV; Eenjes T; Graetz A; Stone EA; Meyer W; Schwessinger B; Rathjen JP
mBio; 2022 Apr; 13(2):e0244421. PubMed ID: 35404122
[TBL] [Abstract][Full Text] [Related]
31. Fungal diversity in deep-sea sediments from Magellan seamounts environment of the western Pacific revealed by high-throughput Illumina sequencing.
Yang S; Xu W; Gao Y; Chen X; Luo ZH
J Microbiol; 2020 Oct; 58(10):841-852. PubMed ID: 32876913
[TBL] [Abstract][Full Text] [Related]
32. Vertical Structure of Phyllosphere Fungal Communities in a Tropical Forest in Thailand Uncovered by High-Throughput Sequencing.
Izuno A; Kanzaki M; Artchawakom T; Wachrinrat C; Isagi Y
PLoS One; 2016; 11(11):e0166669. PubMed ID: 27861539
[TBL] [Abstract][Full Text] [Related]
33. Sample Preparation for Fungal Community Analysis by High-Throughput Sequencing of Barcode Amplicons.
Clemmensen KE; Ihrmark K; Durling MB; Lindahl BD
Methods Mol Biol; 2023; 2605():37-64. PubMed ID: 36520388
[TBL] [Abstract][Full Text] [Related]
34. Best practices in metabarcoding of fungi: From experimental design to results.
Tedersoo L; Bahram M; Zinger L; Nilsson RH; Kennedy PG; Yang T; Anslan S; Mikryukov V
Mol Ecol; 2022 May; 31(10):2769-2795. PubMed ID: 35395127
[TBL] [Abstract][Full Text] [Related]
35. Metabarcoding reveals differences in fungal communities between unflooded versus tidal flat soil in coastal saline ecosystem.
Li PD; Jeewon R; Aruna B; Li HY; Lin FC; Wang HK
Sci Total Environ; 2019 Nov; 690():911-922. PubMed ID: 31302555
[TBL] [Abstract][Full Text] [Related]
36. Fungal diversity present on rocks from a polar desert in continental Antarctica assessed using DNA metabarcoding.
de Menezes GCA; Câmara PEAS; Pinto OHB; Carvalho-Silva M; Oliveira FS; Souza CD; Reynaud Schaefer CEG; Convey P; Rosa CA; Rosa LH
Extremophiles; 2021 Mar; 25(2):193-202. PubMed ID: 33651232
[TBL] [Abstract][Full Text] [Related]
37. Different Amplicon Targets for Sequencing-Based Studies of Fungal Diversity.
De Filippis F; Laiola M; Blaiotta G; Ercolini D
Appl Environ Microbiol; 2017 Sep; 83(17):. PubMed ID: 28625991
[TBL] [Abstract][Full Text] [Related]
38. Protocols for Investigating the Leaf Mycobiome Using High-Throughput DNA Sequencing.
Brown SP; Leopold DR; Busby PE
Methods Mol Biol; 2018; 1848():39-51. PubMed ID: 30182227
[TBL] [Abstract][Full Text] [Related]
39. MinION Sequencing of Yeast Mock Communities To Assess the Effect of Databases and ITS-LSU Markers on the Reliability of Metabarcoding Analysis.
Conti A; Casagrande Pierantoni D; Robert V; Corte L; Cardinali G
Microbiol Spectr; 2023 Feb; 11(1):e0105222. PubMed ID: 36519933
[TBL] [Abstract][Full Text] [Related]
40. ITS1 metabarcoding highlights low specificity of lichen mycobiomes at a local scale.
Fernández-Mendoza F; Fleischhacker A; Kopun T; Grube M; Muggia L
Mol Ecol; 2017 Sep; 26(18):4811-4830. PubMed ID: 28771869
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]