274 related articles for article (PubMed ID: 33818631)
1. Codon usage bias and environmental adaptation in microbial organisms.
Arella D; Dilucca M; Giansanti A
Mol Genet Genomics; 2021 May; 296(3):751-762. PubMed ID: 33818631
[TBL] [Abstract][Full Text] [Related]
2. Variation in global codon usage bias among prokaryotic organisms is associated with their lifestyles.
Botzman M; Margalit H
Genome Biol; 2011 Oct; 12(10):R109. PubMed ID: 22032172
[TBL] [Abstract][Full Text] [Related]
3. Codon Usage Optimization in the Prokaryotic Tree of Life: How Synonymous Codons Are Differentially Selected in Sequence Domains with Different Expression Levels and Degrees of Conservation.
López JL; Lozano MJ; Fabre ML; Lagares A
mBio; 2020 Jul; 11(4):. PubMed ID: 32694138
[TBL] [Abstract][Full Text] [Related]
4. Codon bias signatures, organization of microorganisms in codon space, and lifestyle.
Carbone A; Képès F; Zinovyev A
Mol Biol Evol; 2005 Mar; 22(3):547-61. PubMed ID: 15537809
[TBL] [Abstract][Full Text] [Related]
5. Evolution of Codon Usage Bias in Diatoms.
Krasovec M; Filatov DA
Genes (Basel); 2019 Nov; 10(11):. PubMed ID: 31698749
[TBL] [Abstract][Full Text] [Related]
6. Codon usage bias in prokaryotic pyrimidine-ending codons is associated with the degeneracy of the encoded amino acids.
Wald N; Alroy M; Botzman M; Margalit H
Nucleic Acids Res; 2012 Aug; 40(15):7074-83. PubMed ID: 22581775
[TBL] [Abstract][Full Text] [Related]
7. Evidence of multifaceted functions of codon usage in translation within the model beetle Tribolium castaneum.
Whittle CA; Kulkarni A; Extavour CG
DNA Res; 2019 Dec; 26(6):473-484. PubMed ID: 31922535
[TBL] [Abstract][Full Text] [Related]
8. Codon usage bias in radioresistant bacteria.
Dilucca M; Pavlopoulou A; Georgakilas AG; Giansanti A
Gene; 2020 Jun; 742():144554. PubMed ID: 32173539
[TBL] [Abstract][Full Text] [Related]
9. Coupling between protein level selection and codon usage optimization in the evolution of bacteria and archaea.
Ran W; Kristensen DM; Koonin EV
mBio; 2014 Mar; 5(2):e00956-14. PubMed ID: 24667707
[TBL] [Abstract][Full Text] [Related]
10. An improved estimation of tRNA expression to better elucidate the coevolution between tRNA abundance and codon usage in bacteria.
Wei Y; Silke JR; Xia X
Sci Rep; 2019 Feb; 9(1):3184. PubMed ID: 30816249
[TBL] [Abstract][Full Text] [Related]
11. Thermophilic prokaryotes have characteristic patterns of codon usage, amino acid composition and nucleotide content.
Singer GA; Hickey DA
Gene; 2003 Oct; 317(1-2):39-47. PubMed ID: 14604790
[TBL] [Abstract][Full Text] [Related]
12. Comprehensive analysis of synonymous codon usage patterns and influencing factors of porcine epidemic diarrhea virus.
Yu X; Liu J; Li H; Liu B; Zhao B; Ning Z
Arch Virol; 2021 Jan; 166(1):157-165. PubMed ID: 33125585
[TBL] [Abstract][Full Text] [Related]
13. Universal pattern and diverse strengths of successive synonymous codon bias in three domains of life, particularly among prokaryotic genomes.
Guo FB; Ye YN; Zhao HL; Lin D; Wei W
DNA Res; 2012 Dec; 19(6):477-85. PubMed ID: 23132389
[TBL] [Abstract][Full Text] [Related]
14. Multiple Evolutionary Selections Involved in Synonymous Codon Usages in the Streptococcus agalactiae Genome.
Ma YP; Ke H; Liang ZL; Liu ZX; Hao L; Ma JY; Li YG
Int J Mol Sci; 2016 Feb; 17(3):277. PubMed ID: 26927064
[TBL] [Abstract][Full Text] [Related]
15. Translational Selection for Speed Is Not Sufficient to Explain Variation in Bacterial Codon Usage Bias.
Mahajan S; Agashe D
Genome Biol Evol; 2018 Feb; 10(2):562-576. PubMed ID: 29385509
[TBL] [Abstract][Full Text] [Related]
16. Codon usage bias.
Parvathy ST; Udayasuriyan V; Bhadana V
Mol Biol Rep; 2022 Jan; 49(1):539-565. PubMed ID: 34822069
[TBL] [Abstract][Full Text] [Related]
17. Ecological adaptation in bacteria: speciation driven by codon selection.
Retchless AC; Lawrence JG
Mol Biol Evol; 2012 Dec; 29(12):3669-83. PubMed ID: 22740635
[TBL] [Abstract][Full Text] [Related]
18. Elucidation of Codon Usage Signatures across the Domains of Life.
Novoa EM; Jungreis I; Jaillon O; Kellis M
Mol Biol Evol; 2019 Oct; 36(10):2328-2339. PubMed ID: 31220870
[TBL] [Abstract][Full Text] [Related]
19. Variation and selection on codon usage bias across an entire subphylum.
LaBella AL; Opulente DA; Steenwyk JL; Hittinger CT; Rokas A
PLoS Genet; 2019 Jul; 15(7):e1008304. PubMed ID: 31365533
[TBL] [Abstract][Full Text] [Related]
20. A large-scale analysis of codon usage bias in 4868 bacterial genomes shows association of codon adaptation index with GC content, protein functional domains and bacterial phenotypes.
Masłowska-Górnicz A; van den Bosch MRM; Saccenti E; Suarez-Diez M
Biochim Biophys Acta Gene Regul Mech; 2022 Aug; 1865(6):194826. PubMed ID: 35605953
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
