BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

252 related articles for article (PubMed ID: 33820988)

  • 1. Discovering multiple types of DNA methylation from bacteria and microbiome using nanopore sequencing.
    Tourancheau A; Mead EA; Zhang XS; Fang G
    Nat Methods; 2021 May; 18(5):491-498. PubMed ID: 33820988
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Advancing metagenome-assembled genome-based pathogen identification: unraveling the power of long-read assembly algorithms in Oxford Nanopore sequencing.
    Chen Z; Grim CJ; Ramachandran P; Meng J
    Microbiol Spectr; 2024 Jun; 12(6):e0011724. PubMed ID: 38687063
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation.
    Beaulaurier J; Zhu S; Deikus G; Mogno I; Zhang XS; Davis-Richardson A; Canepa R; Triplett EW; Faith JJ; Sebra R; Schadt EE; Fang G
    Nat Biotechnol; 2018 Jan; 36(1):61-69. PubMed ID: 29227468
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Complete, closed bacterial genomes from microbiomes using nanopore sequencing.
    Moss EL; Maghini DG; Bhatt AS
    Nat Biotechnol; 2020 Jun; 38(6):701-707. PubMed ID: 32042169
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Freshwater monitoring by nanopore sequencing.
    Urban L; Holzer A; Baronas JJ; Hall MB; Braeuninger-Weimer P; Scherm MJ; Kunz DJ; Perera SN; Martin-Herranz DE; Tipper ET; Salter SJ; Stammnitz MR
    Elife; 2021 Jan; 10():. PubMed ID: 33461660
    [TBL] [Abstract][Full Text] [Related]  

  • 6. mEnrich-seq: methylation-guided enrichment sequencing of bacterial taxa of interest from microbiome.
    Cao L; Kong Y; Fan Y; Ni M; Tourancheau A; Ksiezarek M; Mead EA; Koo T; Gitman M; Zhang XS; Fang G
    Nat Methods; 2024 Feb; 21(2):236-246. PubMed ID: 38177508
    [TBL] [Abstract][Full Text] [Related]  

  • 7. BugSplit enables genome-resolved metagenomics through highly accurate taxonomic binning of metagenomic assemblies.
    Chandrakumar I; Gauthier NPG; Nelson C; Bonsall MB; Locher K; Charles M; MacDonald C; Krajden M; Manges AR; Chorlton SD
    Commun Biol; 2022 Feb; 5(1):151. PubMed ID: 35194141
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evaluating
    Vosloo S; Huo L; Anderson CL; Dai Z; Sevillano M; Pinto A
    Microbiol Spectr; 2021 Dec; 9(3):e0143421. PubMed ID: 34730411
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improved high-molecular-weight DNA extraction, nanopore sequencing and metagenomic assembly from the human gut microbiome.
    Maghini DG; Moss EL; Vance SE; Bhatt AS
    Nat Protoc; 2021 Jan; 16(1):458-471. PubMed ID: 33277629
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Strain-resolved microbiome sequencing reveals mobile elements that drive bacterial competition on a clinical timescale.
    Zlitni S; Bishara A; Moss EL; Tkachenko E; Kang JB; Culver RN; Andermann TM; Weng Z; Wood C; Handy C; Ji HP; Batzoglou S; Bhatt AS
    Genome Med; 2020 May; 12(1):50. PubMed ID: 32471482
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Identifying Bacterial Airways Infection in Stable Severe Asthma Using Oxford Nanopore Sequencing Technologies.
    Jabeen MF; Sanderson ND; Foster D; Crook DW; Cane JL; Borg C; Connolly C; Thulborn S; Pavord ID; Klenerman P; Street TL; Hinks TSC
    Microbiol Spectr; 2022 Apr; 10(2):e0227921. PubMed ID: 35323032
    [TBL] [Abstract][Full Text] [Related]  

  • 13. cgMSI: pathogen detection within species from nanopore metagenomic sequencing data.
    Zhu X; Zhao L; Huang L; Yang W; Wang L; Yu R
    BMC Bioinformatics; 2023 Oct; 24(1):387. PubMed ID: 37821827
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces.
    Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
    BMC Genomics; 2021 May; 22(1):330. PubMed ID: 33957869
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED.
    Kovaka S; Fan Y; Ni B; Timp W; Schatz MC
    Nat Biotechnol; 2021 Apr; 39(4):431-441. PubMed ID: 33257863
    [TBL] [Abstract][Full Text] [Related]  

  • 16. metaMIC: reference-free misassembly identification and correction of de novo metagenomic assemblies.
    Lai S; Pan S; Sun C; Coelho LP; Chen WH; Zhao XM
    Genome Biol; 2022 Nov; 23(1):242. PubMed ID: 36376928
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Spatial metagenomic characterization of microbial biogeography in the gut.
    Sheth RU; Li M; Jiang W; Sims PA; Leong KW; Wang HH
    Nat Biotechnol; 2019 Aug; 37(8):877-883. PubMed ID: 31332325
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using Nanopore Sequencing to Obtain Complete Bacterial Genomes from Saliva Samples.
    Baker JL
    mSystems; 2022 Oct; 7(5):e0049122. PubMed ID: 35993719
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A new metagenome binning method based on gene uniqueness.
    Kang Y; Wan C; Lu S; Fu Z; Chen AK; Lu Z
    Genes Genomics; 2020 Aug; 42(8):883-892. PubMed ID: 32506266
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Expanded catalog of microbial genes and metagenome-assembled genomes from the pig gut microbiome.
    Chen C; Zhou Y; Fu H; Xiong X; Fang S; Jiang H; Wu J; Yang H; Gao J; Huang L
    Nat Commun; 2021 Feb; 12(1):1106. PubMed ID: 33597514
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.