These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
227 related articles for article (PubMed ID: 33849076)
41. Asymptotic distribution of motifs in a stochastic context-free grammar model of RNA folding. Poznanović S; Heitsch CE J Math Biol; 2014 Dec; 69(6-7):1743-72. PubMed ID: 24384698 [TBL] [Abstract][Full Text] [Related]
44. RNA motif discovery by SHAPE and mutational profiling (SHAPE-MaP). Siegfried NA; Busan S; Rice GM; Nelson JA; Weeks KM Nat Methods; 2014 Sep; 11(9):959-65. PubMed ID: 25028896 [TBL] [Abstract][Full Text] [Related]
45. RNA secondary structure modeling at consistent high accuracy using differential SHAPE. Rice GM; Leonard CW; Weeks KM RNA; 2014 Jun; 20(6):846-54. PubMed ID: 24742934 [TBL] [Abstract][Full Text] [Related]
46. Computational analysis of RNA structures with chemical probing data. Ge P; Zhang S Methods; 2015 Jun; 79-80():60-6. PubMed ID: 25687190 [TBL] [Abstract][Full Text] [Related]
47. Oxfold: kinetic folding of RNA using stochastic context-free grammars and evolutionary information. Anderson JW; Haas PA; Mathieson LA; Volynkin V; Lyngsø R; Tataru P; Hein J Bioinformatics; 2013 Mar; 29(6):704-10. PubMed ID: 23396120 [TBL] [Abstract][Full Text] [Related]
48. Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data. Wu Y; Shi B; Ding X; Liu T; Hu X; Yip KY; Yang ZR; Mathews DH; Lu ZJ Nucleic Acids Res; 2015 Sep; 43(15):7247-59. PubMed ID: 26170232 [TBL] [Abstract][Full Text] [Related]
55. Novel and efficient RNA secondary structure prediction using hierarchical folding. Jabbari H; Condon A; Zhao S J Comput Biol; 2008 Mar; 15(2):139-63. PubMed ID: 18312147 [TBL] [Abstract][Full Text] [Related]
56. Novel Biochemical Tools for Probing HIV RNA Structure. Rausch JW; Sztuba-Solinska J; Lusvarghi S; Le Grice SF Methods Mol Biol; 2016; 1354():91-117. PubMed ID: 26714707 [TBL] [Abstract][Full Text] [Related]
57. RNA Sampler: a new sampling based algorithm for common RNA secondary structure prediction and structural alignment. Xu X; Ji Y; Stormo GD Bioinformatics; 2007 Aug; 23(15):1883-91. PubMed ID: 17537756 [TBL] [Abstract][Full Text] [Related]
58. How do RNA folding algorithms work? Eddy SR Nat Biotechnol; 2004 Nov; 22(11):1457-8. PubMed ID: 15529172 [TBL] [Abstract][Full Text] [Related]
59. Classification of RNA structure change by 'gazing' at experimental data. Woods CT; Laederach A Bioinformatics; 2017 Jun; 33(11):1647-1655. PubMed ID: 28130241 [TBL] [Abstract][Full Text] [Related]
60. Discretized torsional dynamics and the folding of an RNA chain. Fernández A; Salthú R; Cendra H Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics; 1999 Aug; 60(2 Pt B):2105-19. PubMed ID: 11970003 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]