203 related articles for article (PubMed ID: 33863818)
1. Ensemble Switching Unveils a Kinetic Rheostat Mechanism of the Eukaryotic Thiamine Pyrophosphate Riboswitch.
Ma J; Saikia N; Godar S; Hamilton GL; Ding F; Alper J; Sanabria H
RNA; 2021 Apr; 27(7):771-90. PubMed ID: 33863818
[TBL] [Abstract][Full Text] [Related]
2. Conformational Dynamics of thiM Riboswitch To Understand the Gene Regulation Mechanism Using Markov State Modeling and the Residual Fluctuation Network Approach.
Kesherwani M; N H V K; Velmurugan D
J Chem Inf Model; 2018 Aug; 58(8):1638-1651. PubMed ID: 29939019
[TBL] [Abstract][Full Text] [Related]
3. Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution.
Haller A; Altman RB; Soulière MF; Blanchard SC; Micura R
Proc Natl Acad Sci U S A; 2013 Mar; 110(11):4188-93. PubMed ID: 23440214
[TBL] [Abstract][Full Text] [Related]
4. TPP riboswitch aptamer: Role of Mg
Padhi S; Pradhan M; Bung N; Roy A; Bulusu G
J Mol Graph Model; 2019 May; 88():282-291. PubMed ID: 30818079
[TBL] [Abstract][Full Text] [Related]
5. Molecular level insights into the inhibition of gene expression by thiamine pyrophosphate (TPP) analogs for TPP riboswitch: A well-tempered metadynamics simulations study.
Wakchaure PD; Ganguly B
J Mol Graph Model; 2021 May; 104():107849. PubMed ID: 33545607
[TBL] [Abstract][Full Text] [Related]
6. Quantitative and predictive model of kinetic regulation by E. coli TPP riboswitches.
Guedich S; Puffer-Enders B; Baltzinger M; Hoffmann G; Da Veiga C; Jossinet F; Thore S; Bec G; Ennifar E; Burnouf D; Dumas P
RNA Biol; 2016; 13(4):373-90. PubMed ID: 26932506
[TBL] [Abstract][Full Text] [Related]
7. Observation of long-range tertiary interactions during ligand binding by the TPP riboswitch aptamer.
Duesterberg VK; Fischer-Hwang IT; Perez CF; Hogan DW; Block SM
Elife; 2015 Dec; 4():. PubMed ID: 26709838
[TBL] [Abstract][Full Text] [Related]
8. Crystal structure of Escherichia coli thiamine pyrophosphate-sensing riboswitch in the apo state.
Lee HK; Lee YT; Fan L; Wilt HM; Conrad CE; Yu P; Zhang J; Shi G; Ji X; Wang YX; Stagno JR
Structure; 2023 Jul; 31(7):848-859.e3. PubMed ID: 37253356
[TBL] [Abstract][Full Text] [Related]
9. Folding energy landscape of the thiamine pyrophosphate riboswitch aptamer.
Anthony PC; Perez CF; García-García C; Block SM
Proc Natl Acad Sci U S A; 2012 Jan; 109(5):1485-9. PubMed ID: 22219369
[TBL] [Abstract][Full Text] [Related]
10. Structural basis of thiamine pyrophosphate analogues binding to the eukaryotic riboswitch.
Thore S; Frick C; Ban N
J Am Chem Soc; 2008 Jul; 130(26):8116-7. PubMed ID: 18533652
[TBL] [Abstract][Full Text] [Related]
11. Regulation of the thiamine pyrophosphate (TPP)-sensing riboswitch in NMT1 mRNA from Neurospora crassa.
Gong S; Du C; Wang Y
FEBS Lett; 2020 Feb; 594(4):625-635. PubMed ID: 31664711
[TBL] [Abstract][Full Text] [Related]
12. TPP Riboswitch Populates
Kumar S; Reddy G
J Phys Chem B; 2022 Mar; 126(12):2369-2381. PubMed ID: 35298161
[TBL] [Abstract][Full Text] [Related]
13. Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand.
Thore S; Leibundgut M; Ban N
Science; 2006 May; 312(5777):1208-11. PubMed ID: 16675665
[TBL] [Abstract][Full Text] [Related]
14. Unraveling RNA dynamical behavior of TPP riboswitches: a comparison between Escherichia coli and Arabidopsis thaliana.
Antunes D; Jorge NAN; Garcia de Souza Costa M; Passetti F; Caffarena ER
Sci Rep; 2019 Mar; 9(1):4197. PubMed ID: 30862893
[TBL] [Abstract][Full Text] [Related]
15. Imaging metabolite dynamics in living cells using a Spinach-based riboswitch.
You M; Litke JL; Jaffrey SR
Proc Natl Acad Sci U S A; 2015 May; 112(21):E2756-65. PubMed ID: 25964329
[TBL] [Abstract][Full Text] [Related]
16. Exploring the structure, function of thiamine pyrophosphate riboswitch, and designing small molecules for antibacterial activity.
Wakchaure PD; Ganguly B
Wiley Interdiscip Rev RNA; 2023; 14(4):e1774. PubMed ID: 36594112
[TBL] [Abstract][Full Text] [Related]
17. Identification and characterisation of thiamine pyrophosphate (TPP) riboswitch in Elaeis guineensis.
Subki A; Ho CL; Ismail NFN; Zainal Abidin AA; Balia Yusof ZN
PLoS One; 2020; 15(7):e0235431. PubMed ID: 32726320
[TBL] [Abstract][Full Text] [Related]
18. Conformational changes in the expression domain of the Escherichia coli thiM riboswitch.
Rentmeister A; Mayer G; Kuhn N; Famulok M
Nucleic Acids Res; 2007; 35(11):3713-22. PubMed ID: 17517779
[TBL] [Abstract][Full Text] [Related]
19. Thiamine pyrophosphate riboswitch in some representative plant species: a bioinformatics study.
Yadav S; Swati D; Chandrasekharan H
J Comput Biol; 2015 Jan; 22(1):1-9. PubMed ID: 25243980
[TBL] [Abstract][Full Text] [Related]
20. Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.
Lang K; Rieder R; Micura R
Nucleic Acids Res; 2007; 35(16):5370-8. PubMed ID: 17693433
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]