BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

483 related articles for article (PubMed ID: 33888707)

  • 1. Histone dynamics mediate DNA unwrapping and sliding in nucleosomes.
    Armeev GA; Kniazeva AS; Komarova GA; Kirpichnikov MP; Shaytan AK
    Nat Commun; 2021 Apr; 12(1):2387. PubMed ID: 33888707
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Coupling between Histone Conformations and DNA Geometry in Nucleosomes on a Microsecond Timescale: Atomistic Insights into Nucleosome Functions.
    Shaytan AK; Armeev GA; Goncearenco A; Zhurkin VB; Landsman D; Panchenko AR
    J Mol Biol; 2016 Jan; 428(1):221-237. PubMed ID: 26699921
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dissecting DNA-histone interactions in the nucleosome by molecular dynamics simulations of DNA unwrapping.
    Ettig R; Kepper N; Stehr R; Wedemann G; Rippe K
    Biophys J; 2011 Oct; 101(8):1999-2008. PubMed ID: 22004754
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Molecular Mechanism of Spontaneous Nucleosome Unraveling.
    Winogradoff D; Aksimentiev A
    J Mol Biol; 2019 Jan; 431(2):323-335. PubMed ID: 30468737
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Multiscale modeling of nucleosome dynamics.
    Sharma S; Ding F; Dokholyan NV
    Biophys J; 2007 Mar; 92(5):1457-70. PubMed ID: 17142268
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Breaths, Twists, and Turns of Atomistic Nucleosomes.
    Huertas J; Cojocaru V
    J Mol Biol; 2021 Mar; 433(6):166744. PubMed ID: 33309853
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations.
    Kenzaki H; Takada S
    PLoS Comput Biol; 2015 Aug; 11(8):e1004443. PubMed ID: 26262925
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Molecular dynamics of DNA and nucleosomes in solution studied by fast-scanning atomic force microscopy.
    Suzuki Y; Higuchi Y; Hizume K; Yokokawa M; Yoshimura SH; Yoshikawa K; Takeyasu K
    Ultramicroscopy; 2010 May; 110(6):682-8. PubMed ID: 20236766
    [TBL] [Abstract][Full Text] [Related]  

  • 9. H2A-H2B Histone Dimer Plasticity and Its Functional Implications.
    Kniazeva AS; Armeev GA; Shaytan AK
    Cells; 2022 Sep; 11(18):. PubMed ID: 36139412
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Histone tails cooperate to control the breathing of genomic nucleosomes.
    Huertas J; Schöler HR; Cojocaru V
    PLoS Comput Biol; 2021 Jun; 17(6):e1009013. PubMed ID: 34081696
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Histone-DNA contacts in structure/function relationships of nucleosomes as revealed by crosslinking.
    Usachenko SI; Bradbury EM
    Genetica; 1999; 106(1-2):103-15. PubMed ID: 10710716
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Histone chaperones and nucleosome assembly.
    Akey CW; Luger K
    Curr Opin Struct Biol; 2003 Feb; 13(1):6-14. PubMed ID: 12581654
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Structure and dynamics of nucleosomal DNA.
    Muthurajan UM; Park YJ; Edayathumangalam RS; Suto RK; Chakravarthy S; Dyer PN; Luger K
    Biopolymers; 2003 Apr; 68(4):547-56. PubMed ID: 12666179
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Free energy profiles for unwrapping the outer superhelical turn of nucleosomal DNA.
    Kono H; Sakuraba S; Ishida H
    PLoS Comput Biol; 2018 Mar; 14(3):e1006024. PubMed ID: 29505570
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Chromatosome Structure and Dynamics from Molecular Simulations.
    Öztürk MA; De M; Cojocaru V; Wade RC
    Annu Rev Phys Chem; 2020 Apr; 71():101-119. PubMed ID: 32017651
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Distortion of histone octamer core promotes nucleosome mobilization by a chromatin remodeler.
    Sinha KK; Gross JD; Narlikar GJ
    Science; 2017 Jan; 355(6322):. PubMed ID: 28104838
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Nucleosome plasticity is a critical element of chromatin liquid-liquid phase separation and multivalent nucleosome interactions.
    Farr SE; Woods EJ; Joseph JA; Garaizar A; Collepardo-Guevara R
    Nat Commun; 2021 May; 12(1):2883. PubMed ID: 34001913
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Histone octamer rearranges to adapt to DNA unwrapping.
    Bilokapic S; Strauss M; Halic M
    Nat Struct Mol Biol; 2018 Jan; 25(1):101-108. PubMed ID: 29323273
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Nucleosome structural transition during chromatin unfolding is caused by conformational changes in nucleosomal DNA.
    Gavin IM; Usachenko SI; Bavykin SG
    J Biol Chem; 1998 Jan; 273(4):2429-34. PubMed ID: 9442093
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Structural rearrangements of the histone octamer translocate DNA.
    Bilokapic S; Strauss M; Halic M
    Nat Commun; 2018 Apr; 9(1):1330. PubMed ID: 29626188
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 25.