These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

406 related articles for article (PubMed ID: 33902704)

  • 61. Quantitative Assessment of Shotgun Metagenomics and 16S rDNA Amplicon Sequencing in the Study of Human Gut Microbiome.
    Laudadio I; Fulci V; Palone F; Stronati L; Cucchiara S; Carissimi C
    OMICS; 2018 Apr; 22(4):248-254. PubMed ID: 29652573
    [TBL] [Abstract][Full Text] [Related]  

  • 62. Improving Bacterial Metagenomic Research through Long-Read Sequencing.
    Greenman N; Hassouneh SA; Abdelli LS; Johnston C; Azarian T
    Microorganisms; 2024 May; 12(5):. PubMed ID: 38792764
    [TBL] [Abstract][Full Text] [Related]  

  • 63. Metagenomic Sequencing of Multiple Soil Horizons and Sites in Close Vicinity Revealed Novel Secondary Metabolite Diversity.
    Mantri SS; Negri T; Sales-Ortells H; Angelov A; Peter S; Neidhardt H; Oelmann Y; Ziemert N
    mSystems; 2021 Oct; 6(5):e0101821. PubMed ID: 34636675
    [TBL] [Abstract][Full Text] [Related]  

  • 64. Improved Metagenomic Taxonomic Profiling Using a Curated Core Gene-Based Bacterial Database Reveals Unrecognized Species in the Genus
    Chalita M; Ha SM; Kim YO; Oh HS; Yoon SH; Chun J
    Pathogens; 2020 Mar; 9(3):. PubMed ID: 32164338
    [TBL] [Abstract][Full Text] [Related]  

  • 65. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
    Walsh AM; Crispie F; O'Sullivan O; Finnegan L; Claesson MJ; Cotter PD
    Microbiome; 2018 Mar; 6(1):50. PubMed ID: 29554948
    [TBL] [Abstract][Full Text] [Related]  

  • 66. From Whole Genome Shotgun Sequencing to Viral Community Profiling: The ViromeScan Tool.
    Rampelli S; Turroni S; Candela M
    Methods Mol Biol; 2024; 2732():23-28. PubMed ID: 38060115
    [TBL] [Abstract][Full Text] [Related]  

  • 67. Comparative analysis of HiSeq3000 and BGISEQ-500 sequencing platform over whole genome sequencing metagenomics data.
    Kumar A; Robertsen EM; Willassen NP; Fu J; Hjerde E
    Genomics Inform; 2023 Dec; 21(4):e49. PubMed ID: 38224716
    [TBL] [Abstract][Full Text] [Related]  

  • 68. Characterization of Pneumococcal Colonization Dynamics and Antimicrobial Resistance Using Shotgun Metagenomic Sequencing in Intensively Sampled South African Infants.
    Manenzhe RI; Dube FS; Wright M; Lennard K; Mounaud S; Lo SW; Zar HJ; Nierman WC; Nicol MP; Moodley C
    Front Public Health; 2020; 8():543898. PubMed ID: 33072693
    [No Abstract]   [Full Text] [Related]  

  • 69. Sunbeam: an extensible pipeline for analyzing metagenomic sequencing experiments.
    Clarke EL; Taylor LJ; Zhao C; Connell A; Lee JJ; Fett B; Bushman FD; Bittinger K
    Microbiome; 2019 Mar; 7(1):46. PubMed ID: 30902113
    [TBL] [Abstract][Full Text] [Related]  

  • 70. Fecal metagenomics for the simultaneous assessment of diet, parasites, and population genetics of an understudied primate.
    Srivathsan A; Ang A; Vogler AP; Meier R
    Front Zool; 2016; 13():17. PubMed ID: 27103937
    [TBL] [Abstract][Full Text] [Related]  

  • 71. Investigation of machine learning algorithms for taxonomic classification of marine metagenomes.
    Park H; Lim SJ; Cosme J; O'Connell K; Sandeep J; Gayanilo F; Cutter GR; Montes E; Nitikitpaiboon C; Fisher S; Moustahfid H; Thompson LR
    Microbiol Spectr; 2023 Oct; 11(5):e0523722. PubMed ID: 37695074
    [TBL] [Abstract][Full Text] [Related]  

  • 72. InteMAP: Integrated metagenomic assembly pipeline for NGS short reads.
    Lai B; Wang F; Wang X; Duan L; Zhu H
    BMC Bioinformatics; 2015 Aug; 16():244. PubMed ID: 26250558
    [TBL] [Abstract][Full Text] [Related]  

  • 73. Whole-Genome Metagenomic Analysis of the Gut Microbiome in HIV-1-Infected Individuals on Antiretroviral Therapy.
    Bai X; Narayanan A; Nowak P; Ray S; Neogi U; Sönnerborg A
    Front Microbiol; 2021; 12():667718. PubMed ID: 34248876
    [TBL] [Abstract][Full Text] [Related]  

  • 74. ReprDB and panDB: minimalist databases with maximal microbial representation.
    Zhou W; Gay N; Oh J
    Microbiome; 2018 Jan; 6(1):15. PubMed ID: 29347966
    [TBL] [Abstract][Full Text] [Related]  

  • 75. Taxon-Driven Functional Shifts Associated with Storm Flow in an Urban Stream Microbial Community.
    Chaudhary A; Kauser I; Ray A; Poretsky R
    mSphere; 2018 Jul; 3(4):. PubMed ID: 29976643
    [TBL] [Abstract][Full Text] [Related]  

  • 76. metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data.
    Louvel G; Der Sarkissian C; Hanghøj K; Orlando L
    Mol Ecol Resour; 2016 Nov; 16(6):1415-1427. PubMed ID: 27238636
    [TBL] [Abstract][Full Text] [Related]  

  • 77. Clinical Metagenomic Sequencing for Species Identification and Antimicrobial Resistance Prediction in Orthopedic Device Infection.
    Street TL; Sanderson ND; Kolenda C; Kavanagh J; Pickford H; Hoosdally S; Cregan J; Taunt C; Jones E; Oakley S; Atkins BL; Dudareva M; McNally MA; O'Grady J; Crook DW; Eyre DW
    J Clin Microbiol; 2022 Apr; 60(4):e0215621. PubMed ID: 35354286
    [TBL] [Abstract][Full Text] [Related]  

  • 78. Differences in sequencing technologies improve the retrieval of anammox bacterial genome from metagenomes.
    Gori F; Tringe SG; Folino G; van Hijum SA; Op den Camp HJ; Jetten MS; Marchiori E
    BMC Genomics; 2013 Jan; 14():7. PubMed ID: 23324532
    [TBL] [Abstract][Full Text] [Related]  

  • 79. MEGARes 2.0: a database for classification of antimicrobial drug, biocide and metal resistance determinants in metagenomic sequence data.
    Doster E; Lakin SM; Dean CJ; Wolfe C; Young JG; Boucher C; Belk KE; Noyes NR; Morley PS
    Nucleic Acids Res; 2020 Jan; 48(D1):D561-D569. PubMed ID: 31722416
    [TBL] [Abstract][Full Text] [Related]  

  • 80. mOTUs: Profiling Taxonomic Composition, Transcriptional Activity and Strain Populations of Microbial Communities.
    Ruscheweyh HJ; Milanese A; Paoli L; Sintsova A; Mende DR; Zeller G; Sunagawa S
    Curr Protoc; 2021 Aug; 1(8):e218. PubMed ID: 34387940
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 21.