These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

295 related articles for article (PubMed ID: 33920047)

  • 1. A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses.
    Kutnjak D; Tamisier L; Adams I; Boonham N; Candresse T; Chiumenti M; De Jonghe K; Kreuze JF; Lefebvre M; Silva G; Malapi-Wight M; Margaria P; Mavrič Pleško I; McGreig S; Miozzi L; Remenant B; Reynard JS; Rollin J; Rott M; Schumpp O; Massart S; Haegeman A
    Microorganisms; 2021 Apr; 9(4):. PubMed ID: 33920047
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Towards the validation of high-throughput sequencing (HTS) for routine plant virus diagnostics: measurement of variation linked to HTS detection of citrus viruses and viroids.
    Bester R; Cook G; Breytenbach JHJ; Steyn C; De Bruyn R; Maree HJ
    Virol J; 2021 Mar; 18(1):61. PubMed ID: 33752714
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence.
    Gaafar YZA; Westenberg M; Botermans M; László K; De Jonghe K; Foucart Y; Ferretti L; Kutnjak D; Pecman A; Mehle N; Kreuze J; Muller G; Vakirlis N; Beris D; Varveri C; Ziebell H
    Pathogens; 2021 Sep; 10(9):. PubMed ID: 34578206
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Validation of High-Throughput Sequencing (HTS) for Routine Detection of Citrus Viruses and Viroids.
    Bester R; Maree HJ
    Methods Mol Biol; 2024; 2732():199-219. PubMed ID: 38060127
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A Multicenter Study To Evaluate the Performance of High-Throughput Sequencing for Virus Detection.
    Khan AS; Ng SHS; Vandeputte O; Aljanahi A; Deyati A; Cassart JP; Charlebois RL; Taliaferro LP
    mSphere; 2017; 2(5):. PubMed ID: 28932815
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cont-ID: detection of sample cross-contamination in viral metagenomic data.
    Rollin J; Rong W; Massart S
    BMC Biol; 2023 Oct; 21(1):217. PubMed ID: 37833740
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Bioinformatic Tools and Genome Analysis of Citrus tristeza virus.
    Ruiz-García AB; Bester R; Olmos A; Maree HJ
    Methods Mol Biol; 2019; 2015():163-178. PubMed ID: 31222703
    [TBL] [Abstract][Full Text] [Related]  

  • 8. High-throughput sequencing (HTS) for the analysis of viral populations.
    Pérez-Losada M; Arenas M; Galán JC; Bracho MA; Hillung J; García-González N; González-Candelas F
    Infect Genet Evol; 2020 Jun; 80():104208. PubMed ID: 32001386
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Illuminating an Ecological Blackbox: Using High Throughput Sequencing to Characterize the Plant Virome Across Scales.
    Maclot F; Candresse T; Filloux D; Malmstrom CM; Roumagnac P; van der Vlugt R; Massart S
    Front Microbiol; 2020; 11():578064. PubMed ID: 33178159
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The Plant Negative-Sense RNA Virosphere: Virus Discovery Through New Eyes.
    Bejerman N; Debat H; Dietzgen RG
    Front Microbiol; 2020; 11():588427. PubMed ID: 33042103
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detection of single nucleotide polymorphisms in virus genomes assembled from high-throughput sequencing data: large-scale performance testing of sequence analysis strategies.
    Rollin J; Bester R; Brostaux Y; Caglayan K; De Jonghe K; Eichmeier A; Foucart Y; Haegeman A; Koloniuk I; Kominek P; Maree H; Onder S; Posada Céspedes S; Roumi V; Šafářová D; Schumpp O; Ulubas Serce C; Sõmera M; Tamisier L; Vainio E; van der Vlugt RA; Massart S
    PeerJ; 2023; 11():e15816. PubMed ID: 37601254
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evolution of selective-sequencing approaches for virus discovery and virome analysis.
    Kumar A; Murthy S; Kapoor A
    Virus Res; 2017 Jul; 239():172-179. PubMed ID: 28583442
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Current Perspectives on High-Throughput Sequencing (HTS) for Adventitious Virus Detection: Upstream Sample Processing and Library Preparation.
    Ng SH; Braxton C; Eloit M; Feng SF; Fragnoud R; Mallet L; Mee ET; Sathiamoorthy S; Vandeputte O; Khan AS
    Viruses; 2018 Oct; 10(10):. PubMed ID: 30332784
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Virus Detection by High-Throughput Sequencing of Small RNAs: Large-Scale Performance Testing of Sequence Analysis Strategies.
    Massart S; Chiumenti M; De Jonghe K; Glover R; Haegeman A; Koloniuk I; Komínek P; Kreuze J; Kutnjak D; Lotos L; Maclot F; Maliogka V; Maree HJ; Olivier T; Olmos A; Pooggin MM; Reynard JS; Ruiz-García AB; Safarova D; Schneeberger PHH; Sela N; Turco S; Vainio EJ; Varallyay E; Verdin E; Westenberg M; Brostaux Y; Candresse T
    Phytopathology; 2019 Mar; 109(3):488-497. PubMed ID: 30070618
    [TBL] [Abstract][Full Text] [Related]  

  • 15. High Throughput Sequencing For Plant Virus Detection and Discovery.
    Villamor DEV; Ho T; Al Rwahnih M; Martin RR; Tzanetakis IE
    Phytopathology; 2019 May; 109(5):716-725. PubMed ID: 30801236
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Computational Pipeline for the Detection of Plant RNA Viruses Using High-Throughput Sequencing.
    Donaire L; Aranda MA
    Methods Mol Biol; 2024; 2724():1-20. PubMed ID: 37987894
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Looking beyond Virus Detection in RNA Sequencing Data: Lessons Learned from a Community-Based Effort to Detect Cellular Plant Pathogens and Pests.
    Haegeman A; Foucart Y; De Jonghe K; Goedefroit T; Al Rwahnih M; Boonham N; Candresse T; Gaafar YZA; Hurtado-Gonzales OP; Kogej Zwitter Z; Kutnjak D; Lamovšek J; Lefebvre M; Malapi M; Mavrič Pleško I; Önder S; Reynard JS; Salavert Pamblanco F; Schumpp O; Stevens K; Pal C; Tamisier L; Ulubaş Serçe Ç; van Duivenbode I; Waite DW; Hu X; Ziebell H; Massart S
    Plants (Basel); 2023 May; 12(11):. PubMed ID: 37299118
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparative study on three viral enrichment approaches based on RNA extraction for plant virus/viroid detection using high-throughput sequencing.
    Gaafar YZA; Ziebell H
    PLoS One; 2020; 15(8):e0237951. PubMed ID: 32841302
    [TBL] [Abstract][Full Text] [Related]  

  • 19. In-depth study of tomato and weed viromes reveals undiscovered plant virus diversity in an agroecosystem.
    Rivarez MPS; Pecman A; Bačnik K; Maksimović O; Vučurović A; Seljak G; Mehle N; Gutiérrez-Aguirre I; Ravnikar M; Kutnjak D
    Microbiome; 2023 Mar; 11(1):60. PubMed ID: 36973750
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Managing the deluge of newly discovered plant viruses and viroids: an optimized scientific and regulatory framework for their characterization and risk analysis.
    Fontdevila Pareta N; Khalili M; Maachi A; Rivarez MPS; Rollin J; Salavert F; Temple C; Aranda MA; Boonham N; Botermans M; Candresse T; Fox A; Hernando Y; Kutnjak D; Marais A; Petter F; Ravnikar M; Selmi I; Tahzima R; Trontin C; Wetzel T; Massart S
    Front Microbiol; 2023; 14():1181562. PubMed ID: 37323908
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 15.