356 related articles for article (PubMed ID: 33924545)
21. Impact of DNA extraction methods on the observed microbial communities from the intestinal flora of the penaeid shrimp Litopenaeus vannamei.
Jiang B; Sun J; Lv A; Hu X; Shi H; Sung Y; Wang Q; Wang Y
FEMS Microbiol Lett; 2019 May; 366(9):. PubMed ID: 31074797
[TBL] [Abstract][Full Text] [Related]
22. Dynamics of the gut microbiota in developmental stages of Litopenaeus vannamei reveal its association with body weight.
Fan J; Chen L; Mai G; Zhang H; Yang J; Deng D; Ma Y
Sci Rep; 2019 Jan; 9(1):734. PubMed ID: 30679786
[TBL] [Abstract][Full Text] [Related]
23. Inconsistent Denoising and Clustering Algorithms for Amplicon Sequence Data.
Koskinen K; Auvinen P; Björkroth KJ; Hultman J
J Comput Biol; 2015 Aug; 22(8):743-51. PubMed ID: 25525895
[TBL] [Abstract][Full Text] [Related]
24. Defining the normal core microbiome of conjunctival microbial communities.
Huang Y; Yang B; Li W
Clin Microbiol Infect; 2016 Jul; 22(7):643.e7-643.e12. PubMed ID: 27102141
[TBL] [Abstract][Full Text] [Related]
25. OTUX: V-region specific OTU database for improved 16S rRNA OTU picking and efficient cross-study taxonomic comparison of microbiomes.
Yadav D; Dutta A; Mande SS
DNA Res; 2019 Apr; 26(2):147-156. PubMed ID: 30624596
[TBL] [Abstract][Full Text] [Related]
26. Insights into the microbiota of larval and postlarval Pacific white shrimp (Penaeus vannamei) along early developmental stages: a case in pond level.
Wang H; Huang J; Wang P; Li T
Mol Genet Genomics; 2020 Nov; 295(6):1517-1528. PubMed ID: 32803300
[TBL] [Abstract][Full Text] [Related]
27. Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences.
Narayan NR; Weinmaier T; Laserna-Mendieta EJ; Claesson MJ; Shanahan F; Dabbagh K; Iwai S; DeSantis TZ
BMC Genomics; 2020 Jan; 21(1):56. PubMed ID: 31952477
[TBL] [Abstract][Full Text] [Related]
28. Assessment of a 16S rRNA amplicon Illumina sequencing procedure for studying the microbiome of a symbiont-rich aphid genus.
Jousselin E; Clamens AL; Galan M; Bernard M; Maman S; Gschloessl B; Duport G; Meseguer AS; Calevro F; Coeur d'acier A
Mol Ecol Resour; 2016 May; 16(3):628-40. PubMed ID: 26458227
[TBL] [Abstract][Full Text] [Related]
29. Metagenomic comparison of structure and function of microbial community between water, effluent and shrimp intestine of higher place Litopenaeus vannamei ponds.
He Z; Pan L; Zhang M; Zhang M; Huang F; Gao S
J Appl Microbiol; 2020 Aug; 129(2):243-255. PubMed ID: 32043695
[TBL] [Abstract][Full Text] [Related]
30. Evaluation of composition and individual variability of rumen microbiota in yaks by 16S rRNA high-throughput sequencing technology.
Guo W; Li Y; Wang L; Wang J; Xu Q; Yan T; Xue B
Anaerobe; 2015 Aug; 34():74-9. PubMed ID: 25911445
[TBL] [Abstract][Full Text] [Related]
31. Microbiome Analysis Using 16S Amplicon Sequencing: From Samples to ASVs.
Amir A
Methods Mol Biol; 2021; 2243():123-141. PubMed ID: 33606256
[TBL] [Abstract][Full Text] [Related]
32. "Candidatus Hepatobacter penaei," an intracellular pathogenic enteric bacterium in the hepatopancreas of the marine shrimp Penaeus vannamei (Crustacea: Decapoda).
Nunan LM; Pantoja CR; Gomez-Jimenez S; Lightner DV
Appl Environ Microbiol; 2013 Feb; 79(4):1407-9. PubMed ID: 23241970
[TBL] [Abstract][Full Text] [Related]
33. Different next generation sequencing platforms produce different microbial profiles and diversity in cystic fibrosis sputum.
Hahn A; Sanyal A; Perez GF; Colberg-Poley AM; Campos J; Rose MC; Pérez-Losada M
J Microbiol Methods; 2016 Nov; 130():95-99. PubMed ID: 27609714
[TBL] [Abstract][Full Text] [Related]
34. Large-scale benchmarking reveals false discoveries and count transformation sensitivity in 16S rRNA gene amplicon data analysis methods used in microbiome studies.
Thorsen J; Brejnrod A; Mortensen M; Rasmussen MA; Stokholm J; Al-Soud WA; Sørensen S; Bisgaard H; Waage J
Microbiome; 2016 Nov; 4(1):62. PubMed ID: 27884206
[TBL] [Abstract][Full Text] [Related]
35. Capturing the diversity of the human gut microbiota through culture-enriched molecular profiling.
Lau JT; Whelan FJ; Herath I; Lee CH; Collins SM; Bercik P; Surette MG
Genome Med; 2016 Jul; 8(1):72. PubMed ID: 27363992
[TBL] [Abstract][Full Text] [Related]
36. Profiling the Gastrointestinal Microbiota.
Posteraro B; De Maio F; Gasbarrini A
Methods Mol Biol; 2021; 2283():83-92. PubMed ID: 33765312
[TBL] [Abstract][Full Text] [Related]
37. Evaluation of PacBio sequencing for full-length bacterial 16S rRNA gene classification.
Wagner J; Coupland P; Browne HP; Lawley TD; Francis SC; Parkhill J
BMC Microbiol; 2016 Nov; 16(1):274. PubMed ID: 27842515
[TBL] [Abstract][Full Text] [Related]
38. Exploration of the candidate beneficial bacteria for Penaeus vannamei culture by core microbiome analysis using amplicon sequencing.
Lalitha N; Ronald BSM; Chitra MA; Jangam AK; Katneni VK; Suganya PN; Senthilnayagam H; Senthilkumar TMA; Muralidhar M
Lett Appl Microbiol; 2023 Aug; 76(8):. PubMed ID: 37541955
[TBL] [Abstract][Full Text] [Related]
39. In Silico and Experimental Evaluation of Primer Sets for Species-Level Resolution of the Vaginal Microbiota Using 16S Ribosomal RNA Gene Sequencing.
Van Der Pol WJ; Kumar R; Morrow CD; Blanchard EE; Taylor CM; Martin DH; Lefkowitz EJ; Muzny CA
J Infect Dis; 2019 Jan; 219(2):305-314. PubMed ID: 30535155
[TBL] [Abstract][Full Text] [Related]
40. Diet and irradiation effects on the bacterial community composition and structure in the gut of domesticated teneral and mature Queensland fruit fly, Bactrocera tryoni (Diptera: Tephritidae).
Woruba DN; Morrow JL; Reynolds OL; Chapman TA; Collins DP; Riegler M
BMC Microbiol; 2019 Dec; 19(Suppl 1):281. PubMed ID: 31870300
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
