535 related articles for article (PubMed ID: 33956157)
1. Mol* Viewer: modern web app for 3D visualization and analysis of large biomolecular structures.
Sehnal D; Bittrich S; Deshpande M; Svobodová R; Berka K; Bazgier V; Velankar S; Burley SK; Koča J; Rose AS
Nucleic Acids Res; 2021 Jul; 49(W1):W431-W437. PubMed ID: 33956157
[TBL] [Abstract][Full Text] [Related]
2. NGL Viewer: a web application for molecular visualization.
Rose AS; Hildebrand PW
Nucleic Acids Res; 2015 Jul; 43(W1):W576-9. PubMed ID: 25925569
[TBL] [Abstract][Full Text] [Related]
3. Visualization and Analysis of Protein Structures with LiteMol Suite.
Sehnal D; Svobodová R; Berka K; Pravda L; Midlik A; Koča J
Methods Mol Biol; 2020; 2112():1-13. PubMed ID: 32006274
[TBL] [Abstract][Full Text] [Related]
4. RCSB protein Data Bank: exploring protein 3D similarities via comprehensive structural alignments.
Bittrich S; Segura J; Duarte JM; Burley SK; Rose Y
Bioinformatics; 2024 Jun; 40(6):. PubMed ID: 38870521
[TBL] [Abstract][Full Text] [Related]
5. NGL viewer: web-based molecular graphics for large complexes.
Rose AS; Bradley AR; Valasatava Y; Duarte JM; Prlic A; Rose PW
Bioinformatics; 2018 Nov; 34(21):3755-3758. PubMed ID: 29850778
[TBL] [Abstract][Full Text] [Related]
6. PDBms-An online tool for PDB file splitting and interactive molecular visualization.
Ashok Kumar T
Interdiscip Sci; 2023 Mar; 15(1):146-153. PubMed ID: 36180812
[TBL] [Abstract][Full Text] [Related]
7. RCSB Protein Data bank: Tools for visualizing and understanding biological macromolecules in 3D.
Burley SK; Bhikadiya C; Bi C; Bittrich S; Chao H; Chen L; Craig PA; Crichlow GV; Dalenberg K; Duarte JM; Dutta S; Fayazi M; Feng Z; Flatt JW; Ganesan SJ; Ghosh S; Goodsell DS; Green RK; Guranovic V; Henry J; Hudson BP; Khokhriakov I; Lawson CL; Liang Y; Lowe R; Peisach E; Persikova I; Piehl DW; Rose Y; Sali A; Segura J; Sekharan M; Shao C; Vallat B; Voigt M; Webb B; Westbrook JD; Whetstone S; Young JY; Zalevsky A; Zardecki C
Protein Sci; 2022 Dec; 31(12):e4482. PubMed ID: 36281733
[TBL] [Abstract][Full Text] [Related]
8. Protein Data Bank (PDB): The Single Global Macromolecular Structure Archive.
Burley SK; Berman HM; Kleywegt GJ; Markley JL; Nakamura H; Velankar S
Methods Mol Biol; 2017; 1607():627-641. PubMed ID: 28573592
[TBL] [Abstract][Full Text] [Related]
9. RCSB Protein Data Bank: improved annotation, search and visualization of membrane protein structures archived in the PDB.
Bittrich S; Rose Y; Segura J; Lowe R; Westbrook JD; Duarte JM; Burley SK
Bioinformatics; 2022 Feb; 38(5):1452-1454. PubMed ID: 34864908
[TBL] [Abstract][Full Text] [Related]
10. RCSB Protein Data Bank: Celebrating 50 years of the PDB with new tools for understanding and visualizing biological macromolecules in 3D.
Burley SK; Bhikadiya C; Bi C; Bittrich S; Chen L; Crichlow GV; Duarte JM; Dutta S; Fayazi M; Feng Z; Flatt JW; Ganesan SJ; Goodsell DS; Ghosh S; Kramer Green R; Guranovic V; Henry J; Hudson BP; Lawson CL; Liang Y; Lowe R; Peisach E; Persikova I; Piehl DW; Rose Y; Sali A; Segura J; Sekharan M; Shao C; Vallat B; Voigt M; Westbrook JD; Whetstone S; Young JY; Zardecki C
Protein Sci; 2022 Jan; 31(1):187-208. PubMed ID: 34676613
[TBL] [Abstract][Full Text] [Related]
11. The Protein Data Bank Archive.
Velankar S; Burley SK; Kurisu G; Hoch JC; Markley JL
Methods Mol Biol; 2021; 2305():3-21. PubMed ID: 33950382
[TBL] [Abstract][Full Text] [Related]
12. Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations.
Chareshneu A; Midlik A; Ionescu CM; Rose A; Horský V; Cantara A; Svobodová R; Berka K; Sehnal D
Nucleic Acids Res; 2023 Jul; 51(W1):W326-W330. PubMed ID: 37194693
[TBL] [Abstract][Full Text] [Related]
13. The RCSB protein data bank: integrative view of protein, gene and 3D structural information.
Rose PW; Prlić A; Altunkaya A; Bi C; Bradley AR; Christie CH; Costanzo LD; Duarte JM; Dutta S; Feng Z; Green RK; Goodsell DS; Hudson B; Kalro T; Lowe R; Peisach E; Randle C; Rose AS; Shao C; Tao YP; Valasatava Y; Voigt M; Westbrook JD; Woo J; Yang H; Young JY; Zardecki C; Berman HM; Burley SK
Nucleic Acids Res; 2017 Jan; 45(D1):D271-D281. PubMed ID: 27794042
[TBL] [Abstract][Full Text] [Related]
14. PDBe: improved findability of macromolecular structure data in the PDB.
Armstrong DR; Berrisford JM; Conroy MJ; Gutmanas A; Anyango S; Choudhary P; Clark AR; Dana JM; Deshpande M; Dunlop R; Gane P; Gáborová R; Gupta D; Haslam P; Koča J; Mak L; Mir S; Mukhopadhyay A; Nadzirin N; Nair S; Paysan-Lafosse T; Pravda L; Sehnal D; Salih O; Smart O; Tolchard J; Varadi M; Svobodova-Vařeková R; Zaki H; Kleywegt GJ; Velankar S
Nucleic Acids Res; 2020 Jan; 48(D1):D335-D343. PubMed ID: 31691821
[TBL] [Abstract][Full Text] [Related]
15. RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences.
Burley SK; Bhikadiya C; Bi C; Bittrich S; Chen L; Crichlow GV; Christie CH; Dalenberg K; Di Costanzo L; Duarte JM; Dutta S; Feng Z; Ganesan S; Goodsell DS; Ghosh S; Green RK; Guranović V; Guzenko D; Hudson BP; Lawson CL; Liang Y; Lowe R; Namkoong H; Peisach E; Persikova I; Randle C; Rose A; Rose Y; Sali A; Segura J; Sekharan M; Shao C; Tao YP; Voigt M; Westbrook JD; Young JY; Zardecki C; Zhuravleva M
Nucleic Acids Res; 2021 Jan; 49(D1):D437-D451. PubMed ID: 33211854
[TBL] [Abstract][Full Text] [Related]
16. PDBe: towards reusable data delivery infrastructure at protein data bank in Europe.
Mir S; Alhroub Y; Anyango S; Armstrong DR; Berrisford JM; Clark AR; Conroy MJ; Dana JM; Deshpande M; Gupta D; Gutmanas A; Haslam P; Mak L; Mukhopadhyay A; Nadzirin N; Paysan-Lafosse T; Sehnal D; Sen S; Smart OS; Varadi M; Kleywegt GJ; Velankar S
Nucleic Acids Res; 2018 Jan; 46(D1):D486-D492. PubMed ID: 29126160
[TBL] [Abstract][Full Text] [Related]
17. RCSB Protein Data Bank: Efficient Searching and Simultaneous Access to One Million Computed Structure Models Alongside the PDB Structures Enabled by Architectural Advances.
Bittrich S; Bhikadiya C; Bi C; Chao H; Duarte JM; Dutta S; Fayazi M; Henry J; Khokhriakov I; Lowe R; Piehl DW; Segura J; Vallat B; Voigt M; Westbrook JD; Burley SK; Rose Y
J Mol Biol; 2023 Jul; 435(14):167994. PubMed ID: 36738985
[TBL] [Abstract][Full Text] [Related]
18. Web-based visualisation and analysis of 3D electron-microscopy data from EMDB and PDB.
Lagerstedt I; Moore WJ; Patwardhan A; Sanz-García E; Best C; Swedlow JR; Kleywegt GJ
J Struct Biol; 2013 Nov; 184(2):173-81. PubMed ID: 24113529
[TBL] [Abstract][Full Text] [Related]
19. ProSAT+: visualizing sequence annotations on 3D structure.
Stank A; Richter S; Wade RC
Protein Eng Des Sel; 2016 Aug; 29(8):281-4. PubMed ID: 27284084
[TBL] [Abstract][Full Text] [Related]
20. RCSB PDB Mobile: iOS and Android mobile apps to provide data access and visualization to the RCSB Protein Data Bank.
Quinn GB; Bi C; Christie CH; Pang K; Prlić A; Nakane T; Zardecki C; Voigt M; Berman HM; Bourne PE; Rose PW
Bioinformatics; 2015 Jan; 31(1):126-7. PubMed ID: 25183487
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]