203 related articles for article (PubMed ID: 33961220)
1. Comparative Genomics, from the Annotated Genome to Valuable Biological Information: A Case Study.
Zoledowska S; Motyka-Pomagruk A; Misztak A; Lojkowska E
Methods Mol Biol; 2021; 2242():91-112. PubMed ID: 33961220
[TBL] [Abstract][Full Text] [Related]
2. PacBio-Based Protocol for Bacterial Genome Assembly.
Motyka-Pomagruk A; Zoledowska S; Kabza M; Lojkowska E
Methods Mol Biol; 2021; 2242():3-14. PubMed ID: 33961214
[TBL] [Abstract][Full Text] [Related]
3. Comparative genomics and pangenome-oriented studies reveal high homogeneity of the agronomically relevant enterobacterial plant pathogen Dickeya solani.
Motyka-Pomagruk A; Zoledowska S; Misztak AE; Sledz W; Mengoni A; Lojkowska E
BMC Genomics; 2020 Jun; 21(1):449. PubMed ID: 32600255
[TBL] [Abstract][Full Text] [Related]
4. High genomic variability in the plant pathogenic bacterium Pectobacterium parmentieri deciphered from de novo assembled complete genomes.
Zoledowska S; Motyka-Pomagruk A; Sledz W; Mengoni A; Lojkowska E
BMC Genomics; 2018 Oct; 19(1):751. PubMed ID: 30326842
[TBL] [Abstract][Full Text] [Related]
5. Comparative genomics of 84 Pectobacterium genomes reveals the variations related to a pathogenic lifestyle.
Li X; Ma Y; Liang S; Tian Y; Yin S; Xie S; Xie H
BMC Genomics; 2018 Dec; 19(1):889. PubMed ID: 30526490
[TBL] [Abstract][Full Text] [Related]
6. A re-evaluation of the taxonomy of phytopathogenic genera Dickeya and Pectobacterium using whole-genome sequencing data.
Zhang Y; Fan Q; Loria R
Syst Appl Microbiol; 2016 Jun; 39(4):252-259. PubMed ID: 27130313
[TBL] [Abstract][Full Text] [Related]
7. Transcriptome and Comparative Genomics Analyses Reveal New Functional Insights on Key Determinants of Pathogenesis and Interbacterial Competition in
Bellieny-Rabelo D; Tanui CK; Miguel N; Kwenda S; Shyntum DY; Moleleki LN
Appl Environ Microbiol; 2019 Jan; 85(2):. PubMed ID: 30413477
[TBL] [Abstract][Full Text] [Related]
8. May the Phage be With You? Prophage-Like Elements in the Genomes of Soft Rot
Czajkowski R
Front Microbiol; 2019; 10():138. PubMed ID: 30828320
[TBL] [Abstract][Full Text] [Related]
9. Conserved signature indels and signature proteins as novel tools for understanding microbial phylogeny and systematics: identification of molecular signatures that are specific for the phytopathogenic genera Dickeya, Pectobacterium and Brenneria.
Naushad HS; Lee B; Gupta RS
Int J Syst Evol Microbiol; 2014 Feb; 64(Pt 2):366-383. PubMed ID: 24505075
[TBL] [Abstract][Full Text] [Related]
10. Simple, Reliable, and Time-Efficient Manual Annotation of Bacterial Genomes with MAISEN.
Dziurzynski M; Decewicz P; Ciuchcinski K; Gorecki A; Dziewit L
Methods Mol Biol; 2021; 2242():221-229. PubMed ID: 33961227
[TBL] [Abstract][Full Text] [Related]
11. Genomic and metabolic comparison with Dickeya dadantii 3937 reveals the emerging Dickeya solani potato pathogen to display distinctive metabolic activities and T5SS/T6SS-related toxin repertoire.
Pédron J; Mondy S; des Essarts YR; Van Gijsegem F; Faure D
BMC Genomics; 2014 Apr; 15():283. PubMed ID: 24735398
[TBL] [Abstract][Full Text] [Related]
12. Genomic analysis of the Phalaenopsis pathogen Dickeya sp. PA1, representing the emerging species Dickeya fangzhongdai.
Zhang J; Hu J; Shen H; Zhang Y; Sun D; Pu X; Yang Q; Fan Q; Lin B
BMC Genomics; 2018 Oct; 19(1):782. PubMed ID: 30373513
[TBL] [Abstract][Full Text] [Related]
13. Loop-mediated isothermal amplification (LAMP) assay for specific and rapid detection of Dickeya fangzhongdai targeting a unique genomic region.
DeLude A; Wells R; Boomla S; Chuang SC; Urena F; Shipman A; Rubas N; Kuehu DL; Bickerton B; Peterson T; Dobhal S; Arizala D; Klair D; Ochoa-Corona F; Ali ME; Odani J; Bingham JP; Jenkins DM; Fletcher J; Stack JP; Alvarez AM; Arif M
Sci Rep; 2022 Nov; 12(1):19193. PubMed ID: 36357509
[TBL] [Abstract][Full Text] [Related]
14. Genome Recovery, Functional Profiling, and Taxonomic Classification from Metagenomes.
Albanese D; Donati C
Methods Mol Biol; 2021; 2242():153-172. PubMed ID: 33961223
[TBL] [Abstract][Full Text] [Related]
15. Molecular methods as tools to control plant diseases caused by Dickeya and Pectobacterium spp: A minireview.
Motyka A; Zoledowska S; Sledz W; Lojkowska E
N Biotechnol; 2017 Oct; 39(Pt B):181-189. PubMed ID: 28847714
[TBL] [Abstract][Full Text] [Related]
16. Step-by-Step Bacterial Genome Comparison.
Carhuaricra-Huaman D; Setubal JC
Methods Mol Biol; 2024; 2802():107-134. PubMed ID: 38819558
[TBL] [Abstract][Full Text] [Related]
17. Species Diversity of
Sarfraz S; Sahi ST; Oulghazi S; Riaz K; Rajput NA; Atiq M; Tufail MR; Hameed A; Faure D
Plant Dis; 2020 May; 104(5):1492-1499. PubMed ID: 32150503
[TBL] [Abstract][Full Text] [Related]
18. Inferring Core Genome Phylogenies for Bacteria.
Keller A; Ankenbrand MJ
Methods Mol Biol; 2021; 2242():59-68. PubMed ID: 33961217
[TBL] [Abstract][Full Text] [Related]
19. Assembly, Annotation, and Comparative Analysis of Bifidobacterial Genomes.
Lugli GA
Methods Mol Biol; 2021; 2278():31-44. PubMed ID: 33649946
[TBL] [Abstract][Full Text] [Related]
20. BG7: a new approach for bacterial genome annotation designed for next generation sequencing data.
Pareja-Tobes P; Manrique M; Pareja-Tobes E; Pareja E; Tobes R
PLoS One; 2012; 7(11):e49239. PubMed ID: 23185310
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
