787 related articles for article (PubMed ID: 33986770)
1. A
Ramberg S; Høyheim B; Østbye TK; Andreassen R
Front Genet; 2021; 12():656334. PubMed ID: 33986770
[TBL] [Abstract][Full Text] [Related]
2. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
3. PacBio full-length cDNA sequencing integrated with RNA-seq reads drastically improves the discovery of splicing transcripts in rice.
Zhang G; Sun M; Wang J; Lei M; Li C; Zhao D; Huang J; Li W; Li S; Li J; Yang J; Luo Y; Hu S; Zhang B
Plant J; 2019 Jan; 97(2):296-305. PubMed ID: 30288819
[TBL] [Abstract][Full Text] [Related]
4. Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.
Piriyapongsa J; Kaewprommal P; Vaiwsri S; Anuntakarun S; Wirojsirasak W; Punpee P; Klomsa-Ard P; Shaw PJ; Pootakham W; Yoocha T; Sangsrakru D; Tangphatsornruang S; Tongsima S; Tragoonrung S
PeerJ; 2018; 6():e5818. PubMed ID: 30397543
[TBL] [Abstract][Full Text] [Related]
5. De novo transcriptome assembly, annotation and comparison of four ecological and evolutionary model salmonid fish species.
Carruthers M; Yurchenko AA; Augley JJ; Adams CE; Herzyk P; Elmer KR
BMC Genomics; 2018 Jan; 19(1):32. PubMed ID: 29310597
[TBL] [Abstract][Full Text] [Related]
6. Illuminating the dark side of the human transcriptome with long read transcript sequencing.
Kuo RI; Cheng Y; Zhang R; Brown JWS; Smith J; Archibald AL; Burt DW
BMC Genomics; 2020 Oct; 21(1):751. PubMed ID: 33126848
[TBL] [Abstract][Full Text] [Related]
7. Full-length isoform concatenation sequencing to resolve cancer transcriptome complexity.
Wijeratne S; Gonzalez MEH; Roach K; Miller KE; Schieffer KM; Fitch JR; Leonard J; White P; Kelly BJ; Cottrell CE; Mardis ER; Wilson RK; Miller AR
BMC Genomics; 2024 Jan; 25(1):122. PubMed ID: 38287261
[TBL] [Abstract][Full Text] [Related]
8. PacBio single molecule long-read sequencing provides insight into the complexity and diversity of the Pinctada fucata martensii transcriptome.
Zhang H; Xu H; Liu H; Pan X; Xu M; Zhang G; He M
BMC Genomics; 2020 Jul; 21(1):481. PubMed ID: 32660426
[TBL] [Abstract][Full Text] [Related]
9. A high-quality annotated transcriptome of swine peripheral blood.
Liu H; Smith TPL; Nonneman DJ; Dekkers JCM; Tuggle CK
BMC Genomics; 2017 Jun; 18(1):479. PubMed ID: 28646867
[TBL] [Abstract][Full Text] [Related]
10. PacBio Single-Molecule Long-Read Sequencing Provides New Light on the Complexity of Full-Length Transcripts in Cattle.
Chang T; An B; Liang M; Duan X; Du L; Cai W; Zhu B; Gao X; Chen Y; Xu L; Zhang L; Gao H; Li J
Front Genet; 2021; 12():664974. PubMed ID: 34527015
[TBL] [Abstract][Full Text] [Related]
11. Reconstruction and functional annotation of Ascosphaera apis full-length transcriptome utilizing PacBio long reads combined with Illumina short reads.
Chen D; Du Y; Fan X; Zhu Z; Jiang H; Wang J; Fan Y; Chen H; Zhou D; Xiong C; Zheng Y; Xu X; Luo Q; Guo R
J Invertebr Pathol; 2020 Oct; 176():107475. PubMed ID: 32976816
[TBL] [Abstract][Full Text] [Related]
12. Extending rnaSPAdes functionality for hybrid transcriptome assembly.
Prjibelski AD; Puglia GD; Antipov D; Bushmanova E; Giordano D; Mikheenko A; Vitale D; Lapidus A
BMC Bioinformatics; 2020 Jul; 21(Suppl 12):302. PubMed ID: 32703149
[TBL] [Abstract][Full Text] [Related]
13. Unveiling the transcriptomic complexity of Miscanthus sinensis using a combination of PacBio long read- and Illumina short read sequencing platforms.
Wang Y; Li X; Wang C; Gao L; Wu Y; Ni X; Sun J; Jiang J
BMC Genomics; 2021 Sep; 22(1):690. PubMed ID: 34551715
[TBL] [Abstract][Full Text] [Related]
14. Distinguishing highly similar gene isoforms with a clustering-based bioinformatics analysis of PacBio single-molecule long reads.
Liang M; Raley C; Zheng X; Kutty G; Gogineni E; Sherman BT; Sun Q; Chen X; Skelly T; Jones K; Stephens R; Zhou B; Lau W; Johnson C; Imamichi T; Jiang M; Dewar R; Lempicki RA; Tran B; Kovacs JA; Huang DW
BioData Min; 2016; 9():13. PubMed ID: 27051465
[TBL] [Abstract][Full Text] [Related]
15. Completion of draft bacterial genomes by long-read sequencing of synthetic genomic pools.
Derakhshani H; Bernier SP; Marko VA; Surette MG
BMC Genomics; 2020 Jul; 21(1):519. PubMed ID: 32727443
[TBL] [Abstract][Full Text] [Related]
16. The generation of the first chromosome-level de novo genome assembly and the development and validation of a 50K SNP array for the St. John River aquaculture strain of North American Atlantic salmon.
Gao G; Waldbieser GC; Youngblood RC; Zhao D; Pietrak MR; Allen MS; Stannard JA; Buchanan JT; Long RL; Milligan M; Burr G; Mejía-Guerra K; Sheehan MJ; Scheffler BE; Rexroad CE; Peterson BC; Palti Y
G3 (Bethesda); 2023 Aug; 13(9):. PubMed ID: 37335943
[TBL] [Abstract][Full Text] [Related]
17. SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M; de la Fuente L; Marti C; Pereira C; Pardo-Palacios FJ; Del Risco H; Ferrell M; Mellado M; Macchietto M; Verheggen K; Edelmann M; Ezkurdia I; Vazquez J; Tress M; Mortazavi A; Martens L; Rodriguez-Navarro S; Moreno-Manzano V; Conesa A
Genome Res; 2018 Feb; 28(3):396-411. PubMed ID: 29440222
[TBL] [Abstract][Full Text] [Related]
18. PacBio single-molecule long-read sequencing shed new light on the transcripts and splice isoforms of the perennial ryegrass.
Xie L; Teng K; Tan P; Chao Y; Li Y; Guo W; Han L
Mol Genet Genomics; 2020 Mar; 295(2):475-489. PubMed ID: 31894400
[TBL] [Abstract][Full Text] [Related]
19. The Long Read Transcriptome of Rice (Oryza sativa ssp. japonica var. Nipponbare) Reveals Novel Transcripts.
Hasan S; Huang L; Liu Q; Perlo V; O'Keeffe A; Margarido GRA; Furtado A; Henry RJ
Rice (N Y); 2022 Jun; 15(1):29. PubMed ID: 35689714
[TBL] [Abstract][Full Text] [Related]
20. A hybrid and scalable error correction algorithm for indel and substitution errors of long reads.
Das AK; Goswami S; Lee K; Park SJ
BMC Genomics; 2019 Dec; 20(Suppl 11):948. PubMed ID: 31856721
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]