253 related articles for article (PubMed ID: 33989333)
21. Identification of Gene Regulatory Networks Using Variational Bayesian Inference in the Presence of Missing Data.
Liu Q; Li J; Dong M; Liu M; Chai Y
IEEE/ACM Trans Comput Biol Bioinform; 2023; 20(1):399-409. PubMed ID: 35061589
[TBL] [Abstract][Full Text] [Related]
22. Fusing gene expressions and transitive protein-protein interactions for inference of gene regulatory networks.
Liu W; Rajapakse JC
BMC Syst Biol; 2019 Apr; 13(Suppl 2):37. PubMed ID: 30953534
[TBL] [Abstract][Full Text] [Related]
23. Stability of building gene regulatory networks with sparse autoregressive models.
Rajapakse JC; Mundra PA
BMC Bioinformatics; 2011; 12 Suppl 13(Suppl 13):S17. PubMed ID: 22373004
[TBL] [Abstract][Full Text] [Related]
24. Optimal design of gene knockout experiments for gene regulatory network inference.
Ud-Dean SM; Gunawan R
Bioinformatics; 2016 Mar; 32(6):875-83. PubMed ID: 26568633
[TBL] [Abstract][Full Text] [Related]
25. GeneNetWeaver: in silico benchmark generation and performance profiling of network inference methods.
Schaffter T; Marbach D; Floreano D
Bioinformatics; 2011 Aug; 27(16):2263-70. PubMed ID: 21697125
[TBL] [Abstract][Full Text] [Related]
26. Inferring regulatory networks from expression data using tree-based methods.
Huynh-Thu VA; Irrthum A; Wehenkel L; Geurts P
PLoS One; 2010 Sep; 5(9):. PubMed ID: 20927193
[TBL] [Abstract][Full Text] [Related]
27. BRANE Clust: Cluster-Assisted Gene Regulatory Network Inference Refinement.
Pirayre A; Couprie C; Duval L; Pesquet JC
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(3):850-860. PubMed ID: 28368827
[TBL] [Abstract][Full Text] [Related]
28. Recurrent neural network-based modeling of gene regulatory network using elephant swarm water search algorithm.
Mandal S; Saha G; Pal RK
J Bioinform Comput Biol; 2017 Aug; 15(4):1750016. PubMed ID: 28659000
[TBL] [Abstract][Full Text] [Related]
29. Supervised learning of gene-regulatory networks based on graph distance profiles of transcriptomics data.
Razaghi-Moghadam Z; Nikoloski Z
NPJ Syst Biol Appl; 2020 Jun; 6(1):21. PubMed ID: 32606380
[TBL] [Abstract][Full Text] [Related]
30. Highly sensitive inference of time-delayed gene regulation by network deconvolution.
Chen H; Mundra PA; Zhao LN; Lin F; Zheng J
BMC Syst Biol; 2014; 8 Suppl 4(Suppl 4):S6. PubMed ID: 25521243
[TBL] [Abstract][Full Text] [Related]
31. Employing decomposable partially observable Markov decision processes to control gene regulatory networks.
Erdogdu U; Polat F; Alhajj R
Artif Intell Med; 2017 Nov; 83():14-34. PubMed ID: 28733120
[TBL] [Abstract][Full Text] [Related]
32. Steady state analysis of the genetic regulatory network incorporating underlying molecular mechanisms for anaerobic metabolism in Escherichia coli.
Srinivasan S; Venkatesh KV
Mol Biosyst; 2014 Mar; 10(3):562-75. PubMed ID: 24402032
[TBL] [Abstract][Full Text] [Related]
33. Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans.
Castro JC; Valdés I; Gonzalez-García LN; Danies G; Cañas S; Winck FV; Ñústez CE; Restrepo S; Riaño-Pachón DM
Theor Biol Med Model; 2019 Apr; 16(1):7. PubMed ID: 30961611
[TBL] [Abstract][Full Text] [Related]
34. How difficult is inference of mammalian causal gene regulatory networks?
Djordjevic D; Yang A; Zadoorian A; Rungrugeecharoen K; Ho JW
PLoS One; 2014; 9(11):e111661. PubMed ID: 25369032
[TBL] [Abstract][Full Text] [Related]
35. BRANE Cut: biologically-related a priori network enhancement with graph cuts for gene regulatory network inference.
Pirayre A; Couprie C; Bidard F; Duval L; Pesquet JC
BMC Bioinformatics; 2015 Nov; 16():368. PubMed ID: 26537179
[TBL] [Abstract][Full Text] [Related]
36. Gene regulatory network inference from multifactorial perturbation data using both regression and correlation analyses.
Xiong J; Zhou T
PLoS One; 2012; 7(9):e43819. PubMed ID: 23028471
[TBL] [Abstract][Full Text] [Related]
37. Reverse engineering module networks by PSO-RNN hybrid modeling.
Zhang Y; Xuan J; de los Reyes BG; Clarke R; Ressom HW
BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S15. PubMed ID: 19594874
[TBL] [Abstract][Full Text] [Related]
38. Reverse engineering genetic networks using nonlinear saturation kinetics.
Kizhakkethil Youseph AS; Chetty M; Karmakar G
Biosystems; 2019 Aug; 182():30-41. PubMed ID: 31185246
[TBL] [Abstract][Full Text] [Related]
39. Hybrid method inference for the construction of cooperative regulatory network in human.
Chebil I; Nicolle R; Santini G; Rouveirol C; Elati M
IEEE Trans Nanobioscience; 2014 Jun; 13(2):97-103. PubMed ID: 24771593
[TBL] [Abstract][Full Text] [Related]
40. A Novel Model Integration Network Inference Algorithm with Clustering and Hub Genes Finding.
Li W; Zhang W; Zhang J
Mol Inform; 2020 May; 39(5):e1900075. PubMed ID: 31990443
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
