204 related articles for article (PubMed ID: 33992531)
1. Hi-C as a molecular rangefinder to examine genomic rearrangements.
Kim K; Kim M; Kim Y; Lee D; Jung I
Semin Cell Dev Biol; 2022 Jan; 121():161-170. PubMed ID: 33992531
[TBL] [Abstract][Full Text] [Related]
2. Analysis of Hi-C Data for Discovery of Structural Variations in Cancer.
Song F; Xu J; Dixon J; Yue F
Methods Mol Biol; 2022; 2301():143-161. PubMed ID: 34415534
[TBL] [Abstract][Full Text] [Related]
3. Computational Analysis of Hi-C Data.
Forcato M; Bicciato S
Methods Mol Biol; 2021; 2157():103-125. PubMed ID: 32820401
[TBL] [Abstract][Full Text] [Related]
4. Dynamic Interplay between Structural Variations and 3D Genome Organization in Pancreatic Cancer.
Du Y; Gu Z; Li Z; Yuan Z; Zhao Y; Zheng X; Bo X; Chen H; Wang C
Adv Sci (Weinh); 2022 Jun; 9(18):e2200818. PubMed ID: 35570408
[TBL] [Abstract][Full Text] [Related]
5. Deciphering Hi-C: from 3D genome to function.
Kong S; Zhang Y
Cell Biol Toxicol; 2019 Feb; 35(1):15-32. PubMed ID: 30610495
[TBL] [Abstract][Full Text] [Related]
6. Detecting Spatial Chromatin Organization by Chromosome Conformation Capture II: Genome-Wide Profiling by Hi-C.
Vietri Rudan M; Hadjur S; Sexton T
Methods Mol Biol; 2017; 1589():47-74. PubMed ID: 26900130
[TBL] [Abstract][Full Text] [Related]
7. Identification of copy number variations and translocations in cancer cells from Hi-C data.
Chakraborty A; Ay F
Bioinformatics; 2018 Jan; 34(2):338-345. PubMed ID: 29048467
[TBL] [Abstract][Full Text] [Related]
8. 3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome.
Kim K; Jang I; Kim M; Choi J; Kim MS; Lee B; Jung I
Nucleic Acids Res; 2021 Jan; 49(D1):D38-D46. PubMed ID: 33245777
[TBL] [Abstract][Full Text] [Related]
9. 3D disorganization and rearrangement of genome provide insights into pathogenesis of NAFLD by integrated Hi-C, Nanopore, and RNA sequencing.
Xu L; Yin L; Qi Y; Tan X; Gao M; Peng J
Acta Pharm Sin B; 2021 Oct; 11(10):3150-3164. PubMed ID: 34729306
[TBL] [Abstract][Full Text] [Related]
10. Computational Processing and Quality Control of Hi-C, Capture Hi-C and Capture-C Data.
Hansen P; Gargano M; Hecht J; Ibn-Salem J; Karlebach G; Roehr JT; Robinson PN
Genes (Basel); 2019 Jul; 10(7):. PubMed ID: 31323892
[TBL] [Abstract][Full Text] [Related]
11. Plant In Situ Hi-C Experimental Protocol and Bioinformatic Analysis.
Pérez-de Los Santos FJ; Sotelo-Fonseca JE; Ramírez-Colmenero A; Nützmann HW; Fernandez-Valverde SL; Oktaba K
Methods Mol Biol; 2022; 2512():217-247. PubMed ID: 35818008
[TBL] [Abstract][Full Text] [Related]
12. Identification and utilization of copy number information for correcting Hi-C contact map of cancer cell lines.
Khalil AIS; Muzaki SRBM; Chattopadhyay A; Sanyal A
BMC Bioinformatics; 2020 Nov; 21(1):506. PubMed ID: 33160308
[TBL] [Abstract][Full Text] [Related]
13. Computational methods for predicting 3D genomic organization from high-resolution chromosome conformation capture data.
MacKay K; Kusalik A
Brief Funct Genomics; 2020 Jul; 19(4):292-308. PubMed ID: 32353112
[TBL] [Abstract][Full Text] [Related]
14. Single-cell Hi-C for genome-wide detection of chromatin interactions that occur simultaneously in a single cell.
Nagano T; Lubling Y; Yaffe E; Wingett SW; Dean W; Tanay A; Fraser P
Nat Protoc; 2015 Dec; 10(12):1986-2003. PubMed ID: 26540590
[TBL] [Abstract][Full Text] [Related]
15. Structural variant identification and characterization.
Balachandran P; Beck CR
Chromosome Res; 2020 Mar; 28(1):31-47. PubMed ID: 31907725
[TBL] [Abstract][Full Text] [Related]
16. Evaluation of 3D Chromatin Interactions Using Hi-C.
Hu G
Methods Mol Biol; 2020; 2117():65-78. PubMed ID: 31960372
[TBL] [Abstract][Full Text] [Related]
17. Multifaceted Hi-C benchmarking: what makes a difference in chromosome-scale genome scaffolding?
Kadota M; Nishimura O; Miura H; Tanaka K; Hiratani I; Kuraku S
Gigascience; 2020 Jan; 9(1):. PubMed ID: 31919520
[TBL] [Abstract][Full Text] [Related]
18. Practical Analysis of Genome Contact Interaction Experiments.
Carty MA; Elemento O
Methods Mol Biol; 2016; 1418():177-89. PubMed ID: 27008015
[TBL] [Abstract][Full Text] [Related]
19. Hi-C Analysis to Identify Genome-Wide Chromatin Structural Aberration in Cancer.
Okabe A; Kaneda A
Methods Mol Biol; 2023; 2519():127-140. PubMed ID: 36066718
[TBL] [Abstract][Full Text] [Related]
20. An integrated model for detecting significant chromatin interactions from high-resolution Hi-C data.
Carty M; Zamparo L; Sahin M; González A; Pelossof R; Elemento O; Leslie CS
Nat Commun; 2017 May; 8():15454. PubMed ID: 28513628
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]