226 related articles for article (PubMed ID: 33995905)
1. How to assess the structural dynamics of transcription factors by integrating sparse NMR and EPR constraints with molecular dynamics simulations.
Kozak F; Kurzbach D
Comput Struct Biotechnol J; 2021; 19():2097-2105. PubMed ID: 33995905
[TBL] [Abstract][Full Text] [Related]
2. Molecular Dynamics Simulations Combined with Nuclear Magnetic Resonance and/or Small-Angle X-ray Scattering Data for Characterizing Intrinsically Disordered Protein Conformational Ensembles.
Chan-Yao-Chong M; Durand D; Ha-Duong T
J Chem Inf Model; 2019 May; 59(5):1743-1758. PubMed ID: 30840442
[TBL] [Abstract][Full Text] [Related]
3. A Switch between Two Intrinsically Disordered Conformational Ensembles Modulates the Active Site of a Basic-Helix-Loop-Helix Transcription Factor.
Sicoli G; Kress T; Vezin H; Ledolter K; Kurzbach D
J Phys Chem Lett; 2020 Nov; 11(21):8944-8951. PubMed ID: 33030907
[TBL] [Abstract][Full Text] [Related]
4. NMR Spectroscopic Studies of the Conformational Ensembles of Intrinsically Disordered Proteins.
Kurzbach D; Kontaxis G; Coudevylle N; Konrat R
Adv Exp Med Biol; 2015; 870():149-85. PubMed ID: 26387102
[TBL] [Abstract][Full Text] [Related]
5. High-field EPR on membrane proteins - crossing the gap to NMR.
Möbius K; Lubitz W; Savitsky A
Prog Nucl Magn Reson Spectrosc; 2013 Nov; 75():1-49. PubMed ID: 24160760
[TBL] [Abstract][Full Text] [Related]
6. Conformational propensities of intrinsically disordered proteins from NMR chemical shifts.
Kragelj J; Ozenne V; Blackledge M; Jensen MR
Chemphyschem; 2013 Sep; 14(13):3034-45. PubMed ID: 23794453
[TBL] [Abstract][Full Text] [Related]
7. Development of Cu
Gamble Jarvi A; Sargun A; Bogetti X; Wang J; Achim C; Saxena S
J Phys Chem B; 2020 Sep; 124(35):7544-7556. PubMed ID: 32790374
[TBL] [Abstract][Full Text] [Related]
8. Sequence-Dependent Correlated Segments in the Intrinsically Disordered Region of ChiZ.
Hicks A; Escobar CA; Cross TA; Zhou HX
Biomolecules; 2020 Jun; 10(6):. PubMed ID: 32585849
[TBL] [Abstract][Full Text] [Related]
9. Structure and dynamics of a DNA.RNA hybrid duplex with a chiral phosphorothioate moiety: NMR and molecular dynamics with conventional and time-averaged restraints.
González C; Stec W; Reynolds MA; James TL
Biochemistry; 1995 Apr; 34(15):4969-82. PubMed ID: 7711019
[TBL] [Abstract][Full Text] [Related]
10. Study of a DNA Duplex by Nuclear Magnetic Resonance and Molecular Dynamics Simulations. Validation of Pulsed Dipolar Electron Paramagnetic Resonance Distance Measurements Using Triarylmethyl-Based Spin Labels.
Lomzov AA; Sviridov EA; Shernuykov AV; Shevelev GY; Pyshnyi DV; Bagryanskaya EG
J Phys Chem B; 2016 Jun; 120(23):5125-33. PubMed ID: 27195671
[TBL] [Abstract][Full Text] [Related]
11. Structure and Dynamics of Intrinsically Disordered Proteins.
Fu B; Vendruscolo M
Adv Exp Med Biol; 2015; 870():35-48. PubMed ID: 26387099
[TBL] [Abstract][Full Text] [Related]
12. Motion of a disordered polypeptide chain as studied by paramagnetic relaxation enhancements, 15N relaxation, and molecular dynamics simulations: how fast is segmental diffusion in denatured ubiquitin?
Xue Y; Skrynnikov NR
J Am Chem Soc; 2011 Sep; 133(37):14614-28. PubMed ID: 21819149
[TBL] [Abstract][Full Text] [Related]
13. NMR approaches for structural analysis of multidomain proteins and complexes in solution.
Göbl C; Madl T; Simon B; Sattler M
Prog Nucl Magn Reson Spectrosc; 2014 Jul; 80():26-63. PubMed ID: 24924266
[TBL] [Abstract][Full Text] [Related]
14. High-Pressure EPR and Site-Directed Spin Labeling for Mapping Molecular Flexibility in Proteins.
Lerch MT; Yang Z; Altenbach C; Hubbell WL
Methods Enzymol; 2015; 564():29-57. PubMed ID: 26477247
[TBL] [Abstract][Full Text] [Related]
15. RNA unrestrained molecular dynamics ensemble improves agreement with experimental NMR data compared to single static structure: a test case.
Beckman RA; Moreland D; Louise-May S; Humblet C
J Comput Aided Mol Des; 2006 May; 20(5):263-79. PubMed ID: 17006738
[TBL] [Abstract][Full Text] [Related]
16. Structural Characterization of N-WASP Domain V Using MD Simulations with NMR and SAXS Data.
Chan-Yao-Chong M; Deville C; Pinet L; van Heijenoort C; Durand D; Ha-Duong T
Biophys J; 2019 Apr; 116(7):1216-1227. PubMed ID: 30878202
[TBL] [Abstract][Full Text] [Related]
17. Effect of a Paramagnetic Spin Label on the Intrinsically Disordered Peptide Ensemble of Amyloid-β.
Sasmal S; Lincoff J; Head-Gordon T
Biophys J; 2017 Sep; 113(5):1002-1011. PubMed ID: 28877484
[TBL] [Abstract][Full Text] [Related]
18. Integrated structural biology to unravel molecular mechanisms of protein-RNA recognition.
Schlundt A; Tants JN; Sattler M
Methods; 2017 Apr; 118-119():119-136. PubMed ID: 28315749
[TBL] [Abstract][Full Text] [Related]
19. Complete Coupled Binding-Folding Pathway of the Intrinsically Disordered Transcription Factor Protein Brinker Revealed by Molecular Dynamics Simulations and Markov State Modeling.
Collins AP; Anderson PC
Biochemistry; 2018 Jul; 57(30):4404-4420. PubMed ID: 29990433
[TBL] [Abstract][Full Text] [Related]
20. Molecular Dynamics Simulations Based on Newly Developed Force Field Parameters for Cu
Bogetti X; Ghosh S; Gamble Jarvi A; Wang J; Saxena S
J Phys Chem B; 2020 Apr; 124(14):2788-2797. PubMed ID: 32181671
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
