These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

147 related articles for article (PubMed ID: 34008918)

  • 1. Genotyping single nucleotide polymorphisms and inferring ploidy by amplicon sequencing for polyploid, ploidy-variable organisms.
    Delomas TA; Willis SC; Parker BL; Miller D; Anders P; Schreier A; Narum S
    Mol Ecol Resour; 2021 Oct; 21(7):2288-2298. PubMed ID: 34008918
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions.
    Su SY; White J; Balding DJ; Coin LJ
    BMC Bioinformatics; 2008 Dec; 9():513. PubMed ID: 19046436
    [TBL] [Abstract][Full Text] [Related]  

  • 3. UGbS-Flex, a novel bioinformatics pipeline for imputation-free SNP discovery in polyploids without a reference genome: finger millet as a case study.
    Qi P; Gimode D; Saha D; Schröder S; Chakraborty D; Wang X; Dida MM; Malmberg RL; Devos KM
    BMC Plant Biol; 2018 Jun; 18(1):117. PubMed ID: 29902967
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SNP genotyping and parameter estimation in polyploids using low-coverage sequencing data.
    Blischak PD; Kubatko LS; Wolfe AD
    Bioinformatics; 2018 Feb; 34(3):407-415. PubMed ID: 29028881
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Quantitative SNP genotyping of polyploids with MassARRAY and other platforms.
    Mollinari M; Serang O
    Methods Mol Biol; 2015; 1245():215-41. PubMed ID: 25373761
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recent progress and challenges in population genetics of polyploid organisms: an overview of current state-of-the-art molecular and statistical tools.
    Dufresne F; Stift M; Vergilino R; Mable BK
    Mol Ecol; 2014 Jan; 23(1):40-69. PubMed ID: 24188632
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Inferring the mode of origin of polyploid species from next-generation sequence data.
    Roux C; Pannell JR
    Mol Ecol; 2015 Mar; 24(5):1047-59. PubMed ID: 25585898
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Sorting duplicated loci disentangles complexities of polyploid genomes masked by genotyping by sequencing.
    Limborg MT; Seeb LW; Seeb JE
    Mol Ecol; 2016 May; 25(10):2117-29. PubMed ID: 26939067
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole-genome Sequencing Reveals Autooctoploidy in Chinese Sturgeon and Its Evolutionary Trajectories.
    Wang B; Wu B; Liu X; Hu Y; Ming Y; Bai M; Liu J; Xiao K; Zeng Q; Yang J; Wang H; Guo B; Tan C; Hu Z; Zhao X; Li Y; Yue Z; Mei J; Jiang W; Yang Y; Li Z; Gao Y; Chen L; Jian J; Du H
    Genomics Proteomics Bioinformatics; 2024 May; 22(1):. PubMed ID: 38862424
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Development and preliminary evaluation of a 90 K Axiom® SNP array for the allo-octoploid cultivated strawberry Fragaria × ananassa.
    Bassil NV; Davis TM; Zhang H; Ficklin S; Mittmann M; Webster T; Mahoney L; Wood D; Alperin ES; Rosyara UR; Koehorst-Vanc Putten H; Monfort A; Sargent DJ; Amaya I; Denoyes B; Bianco L; van Dijk T; Pirani A; Iezzoni A; Main D; Peace C; Yang Y; Whitaker V; Verma S; Bellon L; Brew F; Herrera R; van de Weg E
    BMC Genomics; 2015 Mar; 16(1):155. PubMed ID: 25886969
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Polyploid phylogenetics.
    Rothfels CJ
    New Phytol; 2021 Apr; 230(1):66-72. PubMed ID: 33491778
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Plastid genomes reveal recurrent formation of allopolyploid Fragaria.
    Dillenberger MS; Wei N; Tennessen JA; Ashman TL; Liston A
    Am J Bot; 2018 May; 105(5):862-874. PubMed ID: 29797560
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Efficient exact maximum a posteriori computation for bayesian SNP genotyping in polyploids.
    Serang O; Mollinari M; Garcia AA
    PLoS One; 2012; 7(2):e30906. PubMed ID: 22363513
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.
    Motazedi E; Finkers R; Maliepaard C; de Ridder D
    Brief Bioinform; 2018 May; 19(3):387-403. PubMed ID: 28065918
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Differentiating diploid and triploid individuals using single nucleotide polymorphisms genotyped by amplicon sequencing.
    Delomas TA
    Mol Ecol Resour; 2019 Nov; 19(6):1545-1551. PubMed ID: 31448561
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mining sequence variations in representative polyploid sugarcane germplasm accessions.
    Yang X; Song J; You Q; Paudel DR; Zhang J; Wang J
    BMC Genomics; 2017 Aug; 18(1):594. PubMed ID: 28793856
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Tracing evolutionary history and admixture in mixed-ploidy systems.
    Kolář F
    Mol Ecol Resour; 2021 Jul; 21(5):1413-1415. PubMed ID: 33749076
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Sequence coverage required for accurate genotyping by sequencing in polyploid species.
    Wang L; Yang J; Zhang H; Tao Q; Zhang Y; Dang Z; Zhang F; Luo Z
    Mol Ecol Resour; 2022 May; 22(4):1417-1426. PubMed ID: 34826191
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Artificial whole genome duplication in paleopolyploid sturgeons yields highest documented chromosome number in vertebrates.
    Lebeda I; Ráb P; Majtánová Z; Flajšhans M
    Sci Rep; 2020 Nov; 10(1):19705. PubMed ID: 33184410
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Next-generation polyploid phylogenetics: rapid resolution of hybrid polyploid complexes using PacBio single-molecule sequencing.
    Rothfels CJ; Pryer KM; Li FW
    New Phytol; 2017 Jan; 213(1):413-429. PubMed ID: 27463214
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.