224 related articles for article (PubMed ID: 34061826)
1. Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine.
Gu Q; Kumar A; Bray S; Creason A; Khanteymoori A; Jalili V; Grüning B; Goecks J
PLoS Comput Biol; 2021 Jun; 17(6):e1009014. PubMed ID: 34061826
[TBL] [Abstract][Full Text] [Related]
2. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update.
Jalili V; Afgan E; Gu Q; Clements D; Blankenberg D; Goecks J; Taylor J; Nekrutenko A
Nucleic Acids Res; 2020 Jul; 48(W1):W395-W402. PubMed ID: 32479607
[TBL] [Abstract][Full Text] [Related]
3. Cloud bursting galaxy: federated identity and access management.
Jalili V; Afgan E; Taylor J; Goecks J
Bioinformatics; 2020 Jan; 36(1):1-9. PubMed ID: 31197310
[TBL] [Abstract][Full Text] [Related]
4. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update.
Galaxy Community
Nucleic Acids Res; 2022 Jul; 50(W1):W345-W351. PubMed ID: 35446428
[TBL] [Abstract][Full Text] [Related]
5. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update.
Afgan E; Baker D; Batut B; van den Beek M; Bouvier D; Cech M; Chilton J; Clements D; Coraor N; Grüning BA; Guerler A; Hillman-Jackson J; Hiltemann S; Jalili V; Rasche H; Soranzo N; Goecks J; Taylor J; Nekrutenko A; Blankenberg D
Nucleic Acids Res; 2018 Jul; 46(W1):W537-W544. PubMed ID: 29790989
[TBL] [Abstract][Full Text] [Related]
6. Galaxy mothur Toolset (GmT): a user-friendly application for 16S rRNA gene sequencing analysis using mothur.
Hiltemann SD; Boers SA; van der Spek PJ; Jansen R; Hays JP; Stubbs AP
Gigascience; 2019 Feb; 8(2):. PubMed ID: 30597007
[TBL] [Abstract][Full Text] [Related]
7. The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update.
Galaxy Community
Nucleic Acids Res; 2024 Jul; 52(W1):W83-W94. PubMed ID: 38769056
[TBL] [Abstract][Full Text] [Related]
8. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update.
Afgan E; Baker D; van den Beek M; Blankenberg D; Bouvier D; Čech M; Chilton J; Clements D; Coraor N; Eberhard C; Grüning B; Guerler A; Hillman-Jackson J; Von Kuster G; Rasche E; Soranzo N; Turaga N; Taylor J; Nekrutenko A; Goecks J
Nucleic Acids Res; 2016 Jul; 44(W1):W3-W10. PubMed ID: 27137889
[TBL] [Abstract][Full Text] [Related]
9. Federated Galaxy: Biomedical Computing at the Frontier.
Afgan E; Jalili V; Goonasekera N; Taylor J; Goecks J
IEEE Int Conf Cloud Comput; 2018 Jul; 2018():. PubMed ID: 34386295
[TBL] [Abstract][Full Text] [Related]
10. Galaxy: a web-based genome analysis tool for experimentalists.
Blankenberg D; Von Kuster G; Coraor N; Ananda G; Lazarus R; Mangan M; Nekrutenko A; Taylor J
Curr Protoc Mol Biol; 2010 Jan; Chapter 19():Unit 19.10.1-21. PubMed ID: 20069535
[TBL] [Abstract][Full Text] [Related]
11. Democratizing data-independent acquisition proteomics analysis on public cloud infrastructures via the Galaxy framework.
Fahrner M; Föll MC; Grüning BA; Bernt M; Röst H; Schilling O
Gigascience; 2022 Feb; 11():. PubMed ID: 35166338
[TBL] [Abstract][Full Text] [Related]
12. Using Galaxy to Perform Large-Scale Interactive Data Analyses-An Update.
Ostrovsky A; Hillman-Jackson J; Bouvier D; Clements D; Afgan E; Blankenberg D; Schatz MC; Nekrutenko A; Taylor J; Team TG; Lariviere D
Curr Protoc; 2021 Feb; 1(2):e31. PubMed ID: 33583104
[TBL] [Abstract][Full Text] [Related]
13. Galaxy Training: A powerful framework for teaching!
Hiltemann S; Rasche H; Gladman S; Hotz HR; Larivière D; Blankenberg D; Jagtap PD; Wollmann T; Bretaudeau A; Goué N; Griffin TJ; Royaux C; Le Bras Y; Mehta S; Syme A; Coppens F; Droesbeke B; Soranzo N; Bacon W; Psomopoulos F; Gallardo-Alba C; Davis J; Föll MC; Fahrner M; Doyle MA; Serrano-Solano B; Fouilloux AC; van Heusden P; Maier W; Clements D; Heyl F; ; Grüning B; Batut B
PLoS Comput Biol; 2023 Jan; 19(1):e1010752. PubMed ID: 36622853
[TBL] [Abstract][Full Text] [Related]
14. ProtDCal-Suite: A web server for the numerical codification and functional analysis of proteins.
Romero-Molina S; Ruiz-Blanco YB; Green JR; Sanchez-Garcia E
Protein Sci; 2019 Sep; 28(9):1734-1743. PubMed ID: 31271472
[TBL] [Abstract][Full Text] [Related]
15. The Galaxy Platform for Reproducible Affinity Proteomic Mass Spectrometry Data Analysis.
Stewart PA; Kuenzi BM; Mehta S; Kumar P; Johnson JE; Jagtap P; Griffin TJ; Haura EB
Methods Mol Biol; 2019; 1977():249-261. PubMed ID: 30980333
[TBL] [Abstract][Full Text] [Related]
16. Galaxy for open-source computational drug discovery solutions.
Singh Gaur A; Nagamani S; Priyadarsinee L; Mahanta HJ; Parthasarathi R; Sastry GN
Expert Opin Drug Discov; 2023 Jun; 18(6):579-590. PubMed ID: 37089036
[TBL] [Abstract][Full Text] [Related]
17. ReGaTE: Registration of Galaxy Tools in Elixir.
Doppelt-Azeroual O; Mareuil F; Deveaud E; Kalaš M; Soranzo N; van den Beek M; Grüning B; Ison J; Ménager H
Gigascience; 2017 Jun; 6(6):1-4. PubMed ID: 28402416
[TBL] [Abstract][Full Text] [Related]
18. Accessible and reproducible mass spectrometry imaging data analysis in Galaxy.
Föll MC; Moritz L; Wollmann T; Stillger MN; Vockert N; Werner M; Bronsert P; Rohr K; Grüning BA; Schilling O
Gigascience; 2019 Dec; 8(12):. PubMed ID: 31816088
[TBL] [Abstract][Full Text] [Related]
19. APOSTL: An Interactive Galaxy Pipeline for Reproducible Analysis of Affinity Proteomics Data.
Kuenzi BM; Borne AL; Li J; Haura EB; Eschrich SA; Koomen JM; Rix U; Stewart PA
J Proteome Res; 2016 Dec; 15(12):4747-4754. PubMed ID: 27680298
[TBL] [Abstract][Full Text] [Related]
20. KREAP: an automated Galaxy platform to quantify in vitro re-epithelialization kinetics.
Fernandez-Gutierrez MM; van Zessen DBH; van Baarlen P; Kleerebezem M; Stubbs AP
Gigascience; 2018 Jul; 7(7):. PubMed ID: 29961849
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
