These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

235 related articles for article (PubMed ID: 34086933)

  • 1. catRAPID omics v2.0: going deeper and wider in the prediction of protein-RNA interactions.
    Armaos A; Colantoni A; Proietti G; Rupert J; Tartaglia GG
    Nucleic Acids Res; 2021 Jul; 49(W1):W72-W79. PubMed ID: 34086933
    [TBL] [Abstract][Full Text] [Related]  

  • 2. catRAPID omics: a web server for large-scale prediction of protein-RNA interactions.
    Agostini F; Zanzoni A; Klus P; Marchese D; Cirillo D; Tartaglia GG
    Bioinformatics; 2013 Nov; 29(22):2928-30. PubMed ID: 23975767
    [TBL] [Abstract][Full Text] [Related]  

  • 3. omiXcore: a web server for prediction of protein interactions with large RNA.
    Armaos A; Cirillo D; Gaetano Tartaglia G
    Bioinformatics; 2017 Oct; 33(19):3104-3106. PubMed ID: 28637296
    [TBL] [Abstract][Full Text] [Related]  

  • 4. catRAPID signature: identification of ribonucleoproteins and RNA-binding regions.
    Livi CM; Klus P; Delli Ponti R; Tartaglia GG
    Bioinformatics; 2016 Mar; 32(5):773-5. PubMed ID: 26520853
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Computational Prediction of RNA-Protein Interactions.
    Mann CM; Muppirala UK; Dobbs D
    Methods Mol Biol; 2017; 1543():169-185. PubMed ID: 28349426
    [TBL] [Abstract][Full Text] [Related]  

  • 6. RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data.
    Lang B; Armaos A; Tartaglia GG
    Nucleic Acids Res; 2019 Jan; 47(D1):D601-D606. PubMed ID: 30445601
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Constitutive patterns of gene expression regulated by RNA-binding proteins.
    Cirillo D; Marchese D; Agostini F; Livi CM; Botta-Orfila T; Tartaglia GG
    Genome Biol; 2014 Jan; 15(1):R13. PubMed ID: 24401680
    [TBL] [Abstract][Full Text] [Related]  

  • 8. BRIO: a web server for RNA sequence and structure motif scan.
    Guarracino A; Pepe G; Ballesio F; Adinolfi M; Pietrosanto M; Sangiovanni E; Vitale I; Ausiello G; Helmer-Citterich M
    Nucleic Acids Res; 2021 Jul; 49(W1):W67-W71. PubMed ID: 34038531
    [TBL] [Abstract][Full Text] [Related]  

  • 9. PiRaNhA: a server for the computational prediction of RNA-binding residues in protein sequences.
    Murakami Y; Spriggs RV; Nakamura H; Jones S
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W412-6. PubMed ID: 20507911
    [TBL] [Abstract][Full Text] [Related]  

  • 10. RBPmap: a web server for mapping binding sites of RNA-binding proteins.
    Paz I; Kosti I; Ares M; Cline M; Mandel-Gutfreund Y
    Nucleic Acids Res; 2014 Jul; 42(Web Server issue):W361-7. PubMed ID: 24829458
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Predicting RNA-protein interactions using only sequence information.
    Muppirala UK; Honavar VG; Dobbs D
    BMC Bioinformatics; 2011 Dec; 12():489. PubMed ID: 22192482
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SFmap: a web server for motif analysis and prediction of splicing factor binding sites.
    Paz I; Akerman M; Dror I; Kosti I; Mandel-Gutfreund Y
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W281-5. PubMed ID: 20501600
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RBPBind: Quantitative Prediction of Protein-RNA Interactions.
    Gaither J; Lin YH; Bundschuh R
    J Mol Biol; 2022 Jun; 434(11):167515. PubMed ID: 35662470
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Prediction of clustered RNA-binding protein motif sites in the mammalian genome.
    Zhang C; Lee KY; Swanson MS; Darnell RB
    Nucleic Acids Res; 2013 Aug; 41(14):6793-807. PubMed ID: 23685613
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PrismNet: predicting protein-RNA interaction using in vivo RNA structural information.
    Xu Y; Zhu J; Huang W; Xu K; Yang R; Zhang QC; Sun L
    Nucleic Acids Res; 2023 Jul; 51(W1):W468-W477. PubMed ID: 37140045
    [TBL] [Abstract][Full Text] [Related]  

  • 16. RBPmotif: a web server for the discovery of sequence and structure preferences of RNA-binding proteins.
    Kazan H; Morris Q
    Nucleic Acids Res; 2013 Jul; 41(Web Server issue):W180-6. PubMed ID: 23754853
    [TBL] [Abstract][Full Text] [Related]  

  • 17. rMAPS2: an update of the RNA map analysis and plotting server for alternative splicing regulation.
    Hwang JY; Jung S; Kook TL; Rouchka EC; Bok J; Park JW
    Nucleic Acids Res; 2020 Jul; 48(W1):W300-W306. PubMed ID: 32286627
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PRBP: Prediction of RNA-Binding Proteins Using a Random Forest Algorithm Combined with an RNA-Binding Residue Predictor.
    Ma X; Guo J; Xiao K; Sun X
    IEEE/ACM Trans Comput Biol Bioinform; 2015; 12(6):1385-93. PubMed ID: 26671809
    [TBL] [Abstract][Full Text] [Related]  

  • 19. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.
    Li JH; Liu S; Zhou H; Qu LH; Yang JH
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D92-7. PubMed ID: 24297251
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Modeling Protein-Protein or Protein-DNA/RNA Complexes Using the HDOCK Webserver.
    Yan Y; Huang SY
    Methods Mol Biol; 2020; 2165():217-229. PubMed ID: 32621227
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.