BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 34183037)

  • 1. Using Robinson-Foulds supertrees in divide-and-conquer phylogeny estimation.
    Yu X; Le T; Christensen SA; Molloy EK; Warnow T
    Algorithms Mol Biol; 2021 Jun; 16(1):12. PubMed ID: 34183037
    [TBL] [Abstract][Full Text] [Related]  

  • 2. FastRFS: fast and accurate Robinson-Foulds Supertrees using constrained exact optimization.
    Vachaspati P; Warnow T
    Bioinformatics; 2017 Mar; 33(5):631-639. PubMed ID: 27663499
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Invariant transformers of Robinson and Foulds distance matrices for Convolutional Neural Network.
    Tahiri N; Veriga A; Koshkarov A; Morozov B
    J Bioinform Comput Biol; 2022 Aug; 20(4):2250012. PubMed ID: 35798684
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge.
    Molloy EK; Warnow T
    Algorithms Mol Biol; 2019; 14():14. PubMed ID: 31360216
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Fast local search for unrooted Robinson-Foulds supertrees.
    Chaudhary R; Burleigh JG; Fernández-Baca D
    IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(4):1004-13. PubMed ID: 22431553
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Robinson-Foulds supertrees.
    Bansal MS; Burleigh JG; Eulenstein O; Fernández-Baca D
    Algorithms Mol Biol; 2010 Feb; 5():18. PubMed ID: 20181274
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Bad Clade Deletion Supertrees: A Fast and Accurate Supertree Algorithm.
    Fleischauer M; Böcker S
    Mol Biol Evol; 2017 Sep; 34(9):2408-2421. PubMed ID: 28873954
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Quartets MaxCut: a divide and conquer quartets algorithm.
    Snir S; Rao S
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(4):704-18. PubMed ID: 21030737
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Building alternative consensus trees and supertrees using k-means and Robinson and Foulds distance.
    Tahiri N; Fichet B; Makarenkov V
    Bioinformatics; 2022 Jun; 38(13):3367-3376. PubMed ID: 35579343
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Performance of flip supertree construction with a heuristic algorithm.
    Eulenstein O; Chen D; Burleigh JG; Fernández-Baca D; Sanderson MJ
    Syst Biol; 2004 Apr; 53(2):299-308. PubMed ID: 15205054
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Problems with supertrees based on the subtree prune-and-regraft distance, with comments on majority rule supertrees.
    Goloboff PA; Szumik CA
    Cladistics; 2016 Feb; 32(1):82-89. PubMed ID: 34732022
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SIESTA: enhancing searches for optimal supertrees and species trees.
    Vachaspati P; Warnow T
    BMC Genomics; 2018 May; 19(Suppl 5):252. PubMed ID: 29745851
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Supertrees Based on the Subtree Prune-and-Regraft Distance.
    Whidden C; Zeh N; Beiko RG
    Syst Biol; 2014 Jul; 63(4):566-81. PubMed ID: 24695589
    [TBL] [Abstract][Full Text] [Related]  

  • 14. BCD Beam Search: considering suboptimal partial solutions in Bad Clade Deletion supertrees.
    Fleischauer M; Böcker S
    PeerJ; 2018; 6():e4987. PubMed ID: 29900080
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Using max cut to enhance rooted trees consistency.
    Snir S; Rao S
    IEEE/ACM Trans Comput Biol Bioinform; 2006; 3(4):323-33. PubMed ID: 17085842
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Split-based computation of majority-rule supertrees.
    Kupczok A
    BMC Evol Biol; 2011 Jul; 11():205. PubMed ID: 21752249
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Supertree construction in the genomic age.
    Bininda-Emonds OR
    Methods Enzymol; 2005; 395():745-57. PubMed ID: 15865993
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Triplet supertree heuristics for the tree of life.
    Lin HT; Burleigh JG; Eulenstein O
    BMC Bioinformatics; 2009 Jan; 10 Suppl 1(Suppl 1):S8. PubMed ID: 19208181
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The evolution of supertrees.
    Bininda-Emonds OR
    Trends Ecol Evol; 2004 Jun; 19(6):315-22. PubMed ID: 16701277
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Constrained incremental tree building: new absolute fast converging phylogeny estimation methods with improved scalability and accuracy.
    Zhang Q; Rao S; Warnow T
    Algorithms Mol Biol; 2019; 14():2. PubMed ID: 30839943
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.