These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

144 related articles for article (PubMed ID: 34183117)

  • 1. Application and design considerations for 3'-end sequencing using click-chemistry.
    Jensen MK; Elrod ND; Yalamanchili HK; Ji P; Lin A; Liu Z; Wagner EJ
    Methods Enzymol; 2021; 655():1-23. PubMed ID: 34183117
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A computational pipeline to infer alternative poly-adenylation from 3' sequencing data.
    Yalamanchili HK; Elrod ND; Jensen MK; Ji P; Lin A; Wagner EJ; Liu Z
    Methods Enzymol; 2021; 655():185-204. PubMed ID: 34183121
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Poly(A)-ClickSeq: click-chemistry for next-generation 3΄-end sequencing without RNA enrichment or fragmentation.
    Routh A; Ji P; Jaworski E; Xia Z; Li W; Wagner EJ
    Nucleic Acids Res; 2017 Jul; 45(12):e112. PubMed ID: 28449108
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Alternative polyadenylation analysis in animals and plants: newly developed strategies for profiling, processing and validation.
    Zhang Y; Carrion SA; Zhang Y; Zhang X; Zinski AL; Michal JJ; Jiang Z
    Int J Biol Sci; 2018; 14(12):1709-1714. PubMed ID: 30416385
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PolyA-miner: accurate assessment of differential alternative poly-adenylation from 3'Seq data using vector projections and non-negative matrix factorization.
    Yalamanchili HK; Alcott CE; Ji P; Wagner EJ; Zoghbi HY; Liu Z
    Nucleic Acids Res; 2020 Jul; 48(12):e69. PubMed ID: 32463457
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Development of Poly(A)-ClickSeq as a tool enabling simultaneous genome-wide poly(A)-site identification and differential expression analysis.
    Elrod ND; Jaworski EA; Ji P; Wagner EJ; Routh A
    Methods; 2019 Feb; 155():20-29. PubMed ID: 30625385
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Implications of polyadenylation in health and disease.
    Curinha A; Oliveira Braz S; Pereira-Castro I; Cruz A; Moreira A
    Nucleus; 2014; 5(6):508-19. PubMed ID: 25484187
    [TBL] [Abstract][Full Text] [Related]  

  • 8. APA-Scan: detection and visualization of 3'-UTR alternative polyadenylation with RNA-seq and 3'-end-seq data.
    Fahmi NA; Ahmed KT; Chang JW; Nassereddeen H; Fan D; Yong J; Zhang W
    BMC Bioinformatics; 2022 Sep; 23(Suppl 3):396. PubMed ID: 36171568
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Single-molecule polyadenylated tail sequencing (SM-PAT-Seq) to measure polyA tail lengths transcriptome-wide.
    Coon SL; Li T; Iben JR; Mattijssen S; Maraia RJ
    Methods Enzymol; 2021; 655():119-137. PubMed ID: 34183118
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Analyses of alternative polyadenylation: from old school biochemistry to high-throughput technologies.
    Yeh HS; Zhang W; Yong J
    BMB Rep; 2017 Apr; 50(4):201-207. PubMed ID: 28148393
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TRENDseq-A highly multiplexed high throughput RNA 3' end sequencing for mapping alternative polyadenylation.
    Ogorodnikov A; Danckwardt S
    Methods Enzymol; 2021; 655():37-72. PubMed ID: 34183130
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-Wide Profiling of Polyadenylation Events in Maize Using High-Throughput Transcriptomic Sequences.
    Jafar Z; Tariq S; Sadiq I; Nawaz T; Akhtar MN
    G3 (Bethesda); 2019 Aug; 9(8):2749-2760. PubMed ID: 31239292
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A quantitative atlas of polyadenylation in five mammals.
    Derti A; Garrett-Engele P; Macisaac KD; Stevens RC; Sriram S; Chen R; Rohl CA; Johnson JM; Babak T
    Genome Res; 2012 Jun; 22(6):1173-83. PubMed ID: 22454233
    [TBL] [Abstract][Full Text] [Related]  

  • 14. QPAT-seq, a rapid and deduplicatable method for quantification of poly(A) site usages.
    Lin J; Ye C; Li QQ
    Methods Enzymol; 2021; 655():73-83. PubMed ID: 34183134
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genome-wide identification and predictive modeling of tissue-specific alternative polyadenylation.
    Hafez D; Ni T; Mukherjee S; Zhu J; Ohler U
    Bioinformatics; 2013 Jul; 29(13):i108-16. PubMed ID: 23812974
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Genome-wide profiling of the 3' ends of polyadenylated RNAs.
    Sanfilippo P; Miura P; Lai EC
    Methods; 2017 Aug; 126():86-94. PubMed ID: 28602807
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Alternative polyadenylation by sequential activation of distal and proximal PolyA sites.
    Tang P; Yang Y; Li G; Huang L; Wen M; Ruan W; Guo X; Zhang C; Zuo X; Luo D; Xu Y; Fu XD; Zhou Y
    Nat Struct Mol Biol; 2022 Jan; 29(1):21-31. PubMed ID: 35013598
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PAS-seq 2: A fast and sensitive method for global profiling of polyadenylated RNAs.
    Yoon Y; Soles LV; Shi Y
    Methods Enzymol; 2021; 655():25-35. PubMed ID: 34183125
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sequencing of Transcriptome-Wide Poly(A) Tails by PAIso-seq.
    Liu Y; Lu F; Wang J
    Methods Mol Biol; 2024; 2723():215-232. PubMed ID: 37824073
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PAT-Seq: A Method for Simultaneous Quantitation of Gene Expression, Poly(A)-Site Selection and Poly(A)-Length Distribution in Yeast Transcriptomes.
    Swaminathan A; Harrison PF; Preiss T; Beilharz TH
    Methods Mol Biol; 2019; 2049():141-164. PubMed ID: 31602610
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.