181 related articles for article (PubMed ID: 34185678)
1. NCI Imaging Data Commons.
Fedorov A; Longabaugh WJR; Pot D; Clunie DA; Pieper S; Aerts HJWL; Homeyer A; Lewis R; Akbarzadeh A; Bontempi D; Clifford W; Herrmann MD; Höfener H; Octaviano I; Osborne C; Paquette S; Petts J; Punzo D; Reyes M; Schacherer DP; Tian M; White G; Ziegler E; Shmulevich I; Pihl T; Wagner U; Farahani K; Kikinis R
Cancer Res; 2021 Aug; 81(16):4188-4193. PubMed ID: 34185678
[TBL] [Abstract][Full Text] [Related]
2. National Cancer Institute Imaging Data Commons: Toward Transparency, Reproducibility, and Scalability in Imaging Artificial Intelligence.
Fedorov A; Longabaugh WJR; Pot D; Clunie DA; Pieper SD; Gibbs DL; Bridge C; Herrmann MD; Homeyer A; Lewis R; Aerts HJWL; Krishnaswamy D; Thiriveedhi VK; Ciausu C; Schacherer DP; Bontempi D; Pihl T; Wagner U; Farahani K; Kim E; Kikinis R
Radiographics; 2023 Dec; 43(12):e230180. PubMed ID: 37999984
[TBL] [Abstract][Full Text] [Related]
3. The NCI Imaging Data Commons as a platform for reproducible research in computational pathology.
Schacherer DP; Herrmann MD; Clunie DA; Höfener H; Clifford W; Longabaugh WJR; Pieper S; Kikinis R; Fedorov A; Homeyer A
Comput Methods Programs Biomed; 2023 Dec; 242():107839. PubMed ID: 37832430
[TBL] [Abstract][Full Text] [Related]
4. VDJServer: A Cloud-Based Analysis Portal and Data Commons for Immune Repertoire Sequences and Rearrangements.
Christley S; Scarborough W; Salinas E; Rounds WH; Toby IT; Fonner JM; Levin MK; Kim M; Mock SA; Jordan C; Ostmeyer J; Buntzman A; Rubelt F; Davila ML; Monson NL; Scheuermann RH; Cowell LG
Front Immunol; 2018; 9():976. PubMed ID: 29867956
[TBL] [Abstract][Full Text] [Related]
5. caGrid 1.0: an enterprise Grid infrastructure for biomedical research.
Oster S; Langella S; Hastings S; Ervin D; Madduri R; Phillips J; Kurc T; Siebenlist F; Covitz P; Shanbhag K; Foster I; Saltz J
J Am Med Inform Assoc; 2008; 15(2):138-49. PubMed ID: 18096909
[TBL] [Abstract][Full Text] [Related]
6. Data Lakes, Clouds, and Commons: A Review of Platforms for Analyzing and Sharing Genomic Data.
Grossman RL
Trends Genet; 2019 Mar; 35(3):223-234. PubMed ID: 30691868
[TBL] [Abstract][Full Text] [Related]
7. The ISB Cancer Genomics Cloud: A Flexible Cloud-Based Platform for Cancer Genomics Research.
Reynolds SM; Miller M; Lee P; Leinonen K; Paquette SM; Rodebaugh Z; Hahn A; Gibbs DL; Slagel J; Longabaugh WJ; Dhankani V; Reyes M; Pihl T; Backus M; Bookman M; Deflaux N; Bingham J; Pot D; Shmulevich I
Cancer Res; 2017 Nov; 77(21):e7-e10. PubMed ID: 29092928
[TBL] [Abstract][Full Text] [Related]
8. Developing Cancer Informatics Applications and Tools Using the NCI Genomic Data Commons API.
Wilson S; Fitzsimons M; Ferguson M; Heath A; Jensen M; Miller J; Murphy MW; Porter J; Sahni H; Staudt L; Tang Y; Wang Z; Yu C; Zhang J; Ferretti V; Grossman RL;
Cancer Res; 2017 Nov; 77(21):e15-e18. PubMed ID: 29092930
[TBL] [Abstract][Full Text] [Related]
9. Cloud-based large-scale curation of medical imaging data using AI segmentation.
Thiriveedhi VK; Krishnaswamy D; Clunie D; Pieper S; Kikinis R; Fedorov A
Res Sq; 2024 May; ():. PubMed ID: 38746269
[TBL] [Abstract][Full Text] [Related]
10. A program for medical visualization and image processing.
Zaffari CA; Zaffari P; de Azevedo DF; Russomano T; Helegda S; Figueira MV
Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5790-3. PubMed ID: 17947167
[TBL] [Abstract][Full Text] [Related]
11. Using the Seven Bridges Cancer Genomics Cloud to Access and Analyze Petabytes of Cancer Data.
Malhotra R; Seth I; Lehnert E; Zhao J; Kaushik G; Williams EH; Sethi A; Davis-Dusenbery BN
Curr Protoc Bioinformatics; 2017 Dec; 60():11.16.1-11.16.32. PubMed ID: 29220078
[TBL] [Abstract][Full Text] [Related]
12. TCIA: An information resource to enable open science.
Prior FW; Clark K; Commean P; Freymann J; Jaffe C; Kirby J; Moore S; Smith K; Tarbox L; Vendt B; Marquez G
Annu Int Conf IEEE Eng Med Biol Soc; 2013; 2013():1282-5. PubMed ID: 24109929
[TBL] [Abstract][Full Text] [Related]
13. The caBIG annotation and image Markup project.
Channin DS; Mongkolwat P; Kleper V; Sepukar K; Rubin DL
J Digit Imaging; 2010 Apr; 23(2):217-25. PubMed ID: 19294468
[TBL] [Abstract][Full Text] [Related]
14. The NCI Genomic Data Commons.
Heath AP; Ferretti V; Agrawal S; An M; Angelakos JC; Arya R; Bajari R; Baqar B; Barnowski JHB; Burt J; Catton A; Chan BF; Chu F; Cullion K; Davidsen T; Do PM; Dompierre C; Ferguson ML; Fitzsimons MS; Ford M; Fukuma M; Gaheen S; Ganji GL; Garcia TI; George SS; Gerhard DS; Gerthoffert F; Gomez F; Han K; Hernandez KM; Issac B; Jackson R; Jensen MA; Joshi S; Kadam A; Khurana A; Kim KMJ; Kraft VE; Li S; Lichtenberg TM; Lodato J; Lolla L; Martinov P; Mazzone JA; Miller DP; Miller I; Miller JS; Miyauchi K; Murphy MW; Nullet T; Ogwara RO; Ortuño FM; Pedrosa J; Pham PL; Popov MY; Porter JJ; Powell R; Rademacher K; Reid CP; Rich S; Rogel B; Sahni H; Savage JH; Schmitt KA; Simmons TJ; Sislow J; Spring J; Stein L; Sullivan S; Tang Y; Thiagarajan M; Troyer HD; Wang C; Wang Z; West BL; Wilmer A; Wilson S; Wu K; Wysocki WP; Xiang L; Yamada JT; Yang L; Yu C; Yung CK; Zenklusen JC; Zhang J; Zhang Z; Zhao Y; Zubair A; Staudt LM; Grossman RL
Nat Genet; 2021 Mar; 53(3):257-262. PubMed ID: 33619384
[No Abstract] [Full Text] [Related]
15. Insights from Adopting a Data Commons Approach for Large-scale Observational Cohort Studies: The California Teachers Study.
Lacey JV; Chung NT; Hughes P; Benbow JL; Duffy C; Savage KE; Spielfogel ES; Wang SS; Martinez ME; Chandra S
Cancer Epidemiol Biomarkers Prev; 2020 Apr; 29(4):777-786. PubMed ID: 32051191
[TBL] [Abstract][Full Text] [Related]
16. A global view of standards for open image data formats and repositories.
Swedlow JR; Kankaanpää P; Sarkans U; Goscinski W; Galloway G; Malacrida L; Sullivan RP; Härtel S; Brown CM; Wood C; Keppler A; Paina F; Loos B; Zullino S; Longo DL; Aime S; Onami S
Nat Methods; 2021 Dec; 18(12):1440-1446. PubMed ID: 33948027
[No Abstract] [Full Text] [Related]
17. Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud.
Afgan E; Sloggett C; Goonasekera N; Makunin I; Benson D; Crowe M; Gladman S; Kowsar Y; Pheasant M; Horst R; Lonie A
PLoS One; 2015; 10(10):e0140829. PubMed ID: 26501966
[TBL] [Abstract][Full Text] [Related]
18. A Comprehensive Infrastructure for Big Data in Cancer Research: Accelerating Cancer Research and Precision Medicine.
Hinkson IV; Davidsen TM; Klemm JD; Kerlavage AR; Kibbe WA; Chandramouliswaran I
Front Cell Dev Biol; 2017; 5():83. PubMed ID: 28983483
[TBL] [Abstract][Full Text] [Related]
19. Informatics in radiology: GridCAD: grid-based computer-aided detection system.
Pan TC; Gurcan MN; Langella SA; Oster SW; Hastings SL; Sharma A; Rutt BG; Ervin DW; Kurc TM; Siddiqui KM; Saltz JH; Siegel EL
Radiographics; 2007; 27(3):889-97. PubMed ID: 17495299
[TBL] [Abstract][Full Text] [Related]
20. A cloud-based workflow to quantify transcript-expression levels in public cancer compendia.
Tatlow PJ; Piccolo SR
Sci Rep; 2016 Dec; 6():39259. PubMed ID: 27982081
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]