258 related articles for article (PubMed ID: 34197462)
21. MetiTree: a web application to organize and process high-resolution multi-stage mass spectrometry metabolomics data.
Rojas-Chertó M; van Vliet M; Peironcely JE; van Doorn R; Kooyman M; te Beek T; van Driel MA; Hankemeier T; Reijmers T
Bioinformatics; 2012 Oct; 28(20):2707-9. PubMed ID: 22851531
[TBL] [Abstract][Full Text] [Related]
22. Web-based multi-omics integration using the Analyst software suite.
Ewald JD; Zhou G; Lu Y; Kolic J; Ellis C; Johnson JD; Macdonald PE; Xia J
Nat Protoc; 2024 May; 19(5):1467-1497. PubMed ID: 38355833
[TBL] [Abstract][Full Text] [Related]
23. The fobitools framework: the first steps towards food enrichment analysis.
Castellano-Escuder P; Andrés-Lacueva C; Sánchez-Pla A
Bioinformatics; 2021 Nov; 37(21):3969-3971. PubMed ID: 34601570
[TBL] [Abstract][Full Text] [Related]
24. Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.
Kamburov A; Cavill R; Ebbels TM; Herwig R; Keun HC
Bioinformatics; 2011 Oct; 27(20):2917-8. PubMed ID: 21893519
[TBL] [Abstract][Full Text] [Related]
25. leapR: An R Package for Multiomic Pathway Analysis.
Danna V; Mitchell H; Anderson L; Godinez I; Gosline SJC; Teeguarden J; McDermott JE
J Proteome Res; 2021 Apr; 20(4):2116-2121. PubMed ID: 33703901
[TBL] [Abstract][Full Text] [Related]
26. PACOM: A Versatile Tool for Integrating, Filtering, Visualizing, and Comparing Multiple Large Mass Spectrometry Proteomics Data Sets.
Martínez-Bartolomé S; Medina-Aunon JA; López-García MÁ; González-Tejedo C; Prieto G; Navajas R; Salazar-Donate E; Fernández-Costa C; Yates JR; Albar JP
J Proteome Res; 2018 Apr; 17(4):1547-1558. PubMed ID: 29558135
[TBL] [Abstract][Full Text] [Related]
27. Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
Brusniak MY; Bodenmiller B; Campbell D; Cooke K; Eddes J; Garbutt A; Lau H; Letarte S; Mueller LN; Sharma V; Vitek O; Zhang N; Aebersold R; Watts JD
BMC Bioinformatics; 2008 Dec; 9():542. PubMed ID: 19087345
[TBL] [Abstract][Full Text] [Related]
28. PANDA-view: an easy-to-use tool for statistical analysis and visualization of quantitative proteomics data.
Chang C; Xu K; Guo C; Wang J; Yan Q; Zhang J; He F; Zhu Y
Bioinformatics; 2018 Oct; 34(20):3594-3596. PubMed ID: 29790911
[TBL] [Abstract][Full Text] [Related]
29. PiMP my metabolome: an integrated, web-based tool for LC-MS metabolomics data.
Gloaguen Y; Morton F; Daly R; Gurden R; Rogers S; Wandy J; Wilson D; Barrett M; Burgess K
Bioinformatics; 2017 Dec; 33(24):4007-4009. PubMed ID: 28961954
[TBL] [Abstract][Full Text] [Related]
30. RepExplore: addressing technical replicate variance in proteomics and metabolomics data analysis.
Glaab E; Schneider R
Bioinformatics; 2015 Jul; 31(13):2235-7. PubMed ID: 25717197
[TBL] [Abstract][Full Text] [Related]
31. Using MetaboAnalyst 4.0 for Metabolomics Data Analysis, Interpretation, and Integration with Other Omics Data.
Chong J; Xia J
Methods Mol Biol; 2020; 2104():337-360. PubMed ID: 31953825
[TBL] [Abstract][Full Text] [Related]
32. amica: an interactive and user-friendly web-platform for the analysis of proteomics data.
Didusch S; Madern M; Hartl M; Baccarini M
BMC Genomics; 2022 Dec; 23(1):817. PubMed ID: 36494623
[TBL] [Abstract][Full Text] [Related]
33. mineXpert: Biological Mass Spectrometry Data Visualization and Mining with Full JavaScript Ability.
Rusconi F
J Proteome Res; 2019 May; 18(5):2254-2259. PubMed ID: 30950277
[TBL] [Abstract][Full Text] [Related]
34. MetaboReport: from metabolomics data analysis to comprehensive reporting.
Dong Y; Malitsky S
Bioinformatics; 2024 Jun; 40(6):. PubMed ID: 38885410
[TBL] [Abstract][Full Text] [Related]
35. PhenoMeNal: processing and analysis of metabolomics data in the cloud.
Peters K; Bradbury J; Bergmann S; Capuccini M; Cascante M; de Atauri P; Ebbels TMD; Foguet C; Glen R; Gonzalez-Beltran A; Günther UL; Handakas E; Hankemeier T; Haug K; Herman S; Holub P; Izzo M; Jacob D; Johnson D; Jourdan F; Kale N; Karaman I; Khalili B; Emami Khonsari P; Kultima K; Lampa S; Larsson A; Ludwig C; Moreno P; Neumann S; Novella JA; O'Donovan C; Pearce JTM; Peluso A; Piras ME; Pireddu L; Reed MAC; Rocca-Serra P; Roger P; Rosato A; Rueedi R; Ruttkies C; Sadawi N; Salek RM; Sansone SA; Selivanov V; Spjuth O; Schober D; Thévenot EA; Tomasoni M; van Rijswijk M; van Vliet M; Viant MR; Weber RJM; Zanetti G; Steinbeck C
Gigascience; 2019 Feb; 8(2):. PubMed ID: 30535405
[TBL] [Abstract][Full Text] [Related]
36. Scalable Data Analysis in Proteomics and Metabolomics Using BioContainers and Workflows Engines.
Perez-Riverol Y; Moreno P
Proteomics; 2020 May; 20(9):e1900147. PubMed ID: 31657527
[TBL] [Abstract][Full Text] [Related]
37. FunRich: An open access standalone functional enrichment and interaction network analysis tool.
Pathan M; Keerthikumar S; Ang CS; Gangoda L; Quek CY; Williamson NA; Mouradov D; Sieber OM; Simpson RJ; Salim A; Bacic A; Hill AF; Stroud DA; Ryan MT; Agbinya JI; Mariadason JM; Burgess AW; Mathivanan S
Proteomics; 2015 Aug; 15(15):2597-601. PubMed ID: 25921073
[TBL] [Abstract][Full Text] [Related]
38. ProVision: a web-based platform for rapid analysis of proteomics data processed by MaxQuant.
Gallant JL; Heunis T; Sampson SL; Bitter W
Bioinformatics; 2020 Dec; 36(19):4965-4967. PubMed ID: 32638008
[TBL] [Abstract][Full Text] [Related]
39. MetPA: a web-based metabolomics tool for pathway analysis and visualization.
Xia J; Wishart DS
Bioinformatics; 2010 Sep; 26(18):2342-4. PubMed ID: 20628077
[TBL] [Abstract][Full Text] [Related]
40. An evolving computational platform for biological mass spectrometry: workflows, statistics and data mining with MASSyPup64.
Winkler R
PeerJ; 2015; 3():e1401. PubMed ID: 26618079
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
