These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

170 related articles for article (PubMed ID: 34215622)

  • 1. Genetic Determinants of Somatic Selection of Mutational Processes in 3,566 Human Cancers.
    Guo J; Zhou Y; Xu C; Chen Q; Sztupinszki Z; Börcsök J; Xu C; Ye F; Tang W; Kang J; Yang L; Zhong J; Zhong T; Hu T; Yu R; Szallasi Z; Deng X; Li Q
    Cancer Res; 2021 Aug; 81(16):4205-4217. PubMed ID: 34215622
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Clinical and genomic characterization of mutational signatures across human cancers.
    Liao J; Bai J; Pan T; Zou H; Gao Y; Guo J; Xu Q; Xu J; Li Y; Li X
    Int J Cancer; 2023 Apr; 152(8):1613-1629. PubMed ID: 36533638
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples.
    Díaz-Gay M; Vila-Casadesús M; Franch-Expósito S; Hernández-Illán E; Lozano JJ; Castellví-Bel S
    BMC Bioinformatics; 2018 Jun; 19(1):224. PubMed ID: 29898651
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The effects of mutational processes and selection on driver mutations across cancer types.
    Temko D; Tomlinson IPM; Severini S; Schuster-Böckler B; Graham TA
    Nat Commun; 2018 May; 9(1):1857. PubMed ID: 29748584
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evolution of the cancer genome.
    Yates LR; Campbell PJ
    Nat Rev Genet; 2012 Nov; 13(11):795-806. PubMed ID: 23044827
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Somatic structural variation signatures in pediatric brain tumors.
    Yang Y; Yang L
    Cell Rep; 2023 Oct; 42(10):113276. PubMed ID: 37851574
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Signatures of mutational processes in human cancer.
    Alexandrov LB; Nik-Zainal S; Wedge DC; Aparicio SA; Behjati S; Biankin AV; Bignell GR; Bolli N; Borg A; Børresen-Dale AL; Boyault S; Burkhardt B; Butler AP; Caldas C; Davies HR; Desmedt C; Eils R; Eyfjörd JE; Foekens JA; Greaves M; Hosoda F; Hutter B; Ilicic T; Imbeaud S; Imielinski M; Jäger N; Jones DT; Jones D; Knappskog S; Kool M; Lakhani SR; López-Otín C; Martin S; Munshi NC; Nakamura H; Northcott PA; Pajic M; Papaemmanuil E; Paradiso A; Pearson JV; Puente XS; Raine K; Ramakrishna M; Richardson AL; Richter J; Rosenstiel P; Schlesner M; Schumacher TN; Span PN; Teague JW; Totoki Y; Tutt AN; Valdés-Mas R; van Buuren MM; van 't Veer L; Vincent-Salomon A; Waddell N; Yates LR; ; ; ; ; Zucman-Rossi J; Futreal PA; McDermott U; Lichter P; Meyerson M; Grimmond SM; Siebert R; Campo E; Shibata T; Pfister SM; Campbell PJ; Stratton MR
    Nature; 2013 Aug; 500(7463):415-21. PubMed ID: 23945592
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Topography of mutational signatures in human cancer.
    Otlu B; Díaz-Gay M; Vermes I; Bergstrom EN; Zhivagui M; Barnes M; Alexandrov LB
    Cell Rep; 2023 Aug; 42(8):112930. PubMed ID: 37540596
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure.
    Akdemir KC; Le VT; Kim JM; Killcoyne S; King DA; Lin YP; Tian Y; Inoue A; Amin SB; Robinson FS; Nimmakayalu M; Herrera RE; Lynn EJ; Chan K; Seth S; Klimczak LJ; Gerstung M; Gordenin DA; O'Brien J; Li L; Deribe YL; Verhaak RG; Campbell PJ; Fitzgerald R; Morrison AJ; Dixon JR; Andrew Futreal P
    Nat Genet; 2020 Nov; 52(11):1178-1188. PubMed ID: 33020667
    [TBL] [Abstract][Full Text] [Related]  

  • 10. De novo mutational signature discovery in tumor genomes using SparseSignatures.
    Lal A; Liu K; Tibshirani R; Sidow A; Ramazzotti D
    PLoS Comput Biol; 2021 Jun; 17(6):e1009119. PubMed ID: 34181655
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Analysis of Mutational Signatures Using the mutSignatures R Library.
    Fantini D; Meeks JJ
    Methods Mol Biol; 2023; 2684():45-57. PubMed ID: 37410227
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The mutREAD method detects mutational signatures from low quantities of cancer DNA.
    Perner J; Abbas S; Nowicki-Osuch K; Devonshire G; Eldridge MD; Tavaré S; Fitzgerald RC
    Nat Commun; 2020 Jun; 11(1):3166. PubMed ID: 32576827
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Comprehensive analysis of mutational signatures reveals distinct patterns and molecular processes across 27 pediatric cancers.
    Thatikonda V; Islam SMA; Autry RJ; Jones BC; Gröbner SN; Warsow G; Hutter B; Huebschmann D; Fröhling S; Kool M; Blattner-Johnson M; Jones DTW; Alexandrov LB; Pfister SM; Jäger N
    Nat Cancer; 2023 Feb; 4(2):276-289. PubMed ID: 36702933
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computational tools to detect signatures of mutational processes in DNA from tumours: A review and empirical comparison of performance.
    Omichessan H; Severi G; Perduca V
    PLoS One; 2019; 14(9):e0221235. PubMed ID: 31513583
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Signatures of mutation and selection in the cancer genome.
    Bignell GR; Greenman CD; Davies H; Butler AP; Edkins S; Andrews JM; Buck G; Chen L; Beare D; Latimer C; Widaa S; Hinton J; Fahey C; Fu B; Swamy S; Dalgliesh GL; Teh BT; Deloukas P; Yang F; Campbell PJ; Futreal PA; Stratton MR
    Nature; 2010 Feb; 463(7283):893-8. PubMed ID: 20164919
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Driver gene mutations based clustering of tumors: methods and applications.
    Zhang W; Flemington EK; Zhang K
    Bioinformatics; 2018 Jul; 34(13):i404-i411. PubMed ID: 29950003
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The shaping of cancer genomes with the regional impact of mutation processes.
    Lee SY; Wang H; Cho HJ; Xi R; Kim TM
    Exp Mol Med; 2022 Jul; 54(7):1049-1060. PubMed ID: 35902761
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Chromatin accessibility of primary human cancers ties regional mutational processes and signatures with tissues of origin.
    Ocsenas O; Reimand J
    PLoS Comput Biol; 2022 Aug; 18(8):e1010393. PubMed ID: 35947558
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The landscape of cancer genes and mutational processes in breast cancer.
    Stephens PJ; Tarpey PS; Davies H; Van Loo P; Greenman C; Wedge DC; Nik-Zainal S; Martin S; Varela I; Bignell GR; Yates LR; Papaemmanuil E; Beare D; Butler A; Cheverton A; Gamble J; Hinton J; Jia M; Jayakumar A; Jones D; Latimer C; Lau KW; McLaren S; McBride DJ; Menzies A; Mudie L; Raine K; Rad R; Chapman MS; Teague J; Easton D; Langerød A; ; Lee MT; Shen CY; Tee BT; Huimin BW; Broeks A; Vargas AC; Turashvili G; Martens J; Fatima A; Miron P; Chin SF; Thomas G; Boyault S; Mariani O; Lakhani SR; van de Vijver M; van 't Veer L; Foekens J; Desmedt C; Sotiriou C; Tutt A; Caldas C; Reis-Filho JS; Aparicio SA; Salomon AV; Børresen-Dale AL; Richardson AL; Campbell PJ; Futreal PA; Stratton MR
    Nature; 2012 May; 486(7403):400-4. PubMed ID: 22722201
    [TBL] [Abstract][Full Text] [Related]  

  • 20. A comprehensive catalogue of somatic mutations from a human cancer genome.
    Pleasance ED; Cheetham RK; Stephens PJ; McBride DJ; Humphray SJ; Greenman CD; Varela I; Lin ML; Ordóñez GR; Bignell GR; Ye K; Alipaz J; Bauer MJ; Beare D; Butler A; Carter RJ; Chen L; Cox AJ; Edkins S; Kokko-Gonzales PI; Gormley NA; Grocock RJ; Haudenschild CD; Hims MM; James T; Jia M; Kingsbury Z; Leroy C; Marshall J; Menzies A; Mudie LJ; Ning Z; Royce T; Schulz-Trieglaff OB; Spiridou A; Stebbings LA; Szajkowski L; Teague J; Williamson D; Chin L; Ross MT; Campbell PJ; Bentley DR; Futreal PA; Stratton MR
    Nature; 2010 Jan; 463(7278):191-6. PubMed ID: 20016485
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.