304 related articles for article (PubMed ID: 34219317)
41. Co-expression network analysis and cis-regulatory element enrichment determine putative functions and regulatory mechanisms of grapevine ATL E3 ubiquitin ligases.
Wong DCJ; Ariani P; Castellarin S; Polverari A; Vandelle E
Sci Rep; 2018 Feb; 8(1):3151. PubMed ID: 29453355
[TBL] [Abstract][Full Text] [Related]
42. Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction.
Inoue F; Kreimer A; Ashuach T; Ahituv N; Yosef N
Cell Stem Cell; 2019 Nov; 25(5):713-727.e10. PubMed ID: 31631012
[TBL] [Abstract][Full Text] [Related]
43. Genome-wide analysis of chromatin accessibility using ATAC-seq.
Shashikant T; Ettensohn CA
Methods Cell Biol; 2019; 151():219-235. PubMed ID: 30948010
[TBL] [Abstract][Full Text] [Related]
44. IMPACT: Genomic Annotation of Cell-State-Specific Regulatory Elements Inferred from the Epigenome of Bound Transcription Factors.
Amariuta T; Luo Y; Gazal S; Davenport EE; van de Geijn B; Ishigaki K; Westra HJ; Teslovich N; Okada Y; Yamamoto K; ; Price AL; Raychaudhuri S
Am J Hum Genet; 2019 May; 104(5):879-895. PubMed ID: 31006511
[TBL] [Abstract][Full Text] [Related]
45. The functional consequences of variation in transcription factor binding.
Cusanovich DA; Pavlovic B; Pritchard JK; Gilad Y
PLoS Genet; 2014 Mar; 10(3):e1004226. PubMed ID: 24603674
[TBL] [Abstract][Full Text] [Related]
46. Distinct features of H3K4me3 and H3K27me3 chromatin domains in pre-implantation embryos.
Liu X; Wang C; Liu W; Li J; Li C; Kou X; Chen J; Zhao Y; Gao H; Wang H; Zhang Y; Gao Y; Gao S
Nature; 2016 Sep; 537(7621):558-562. PubMed ID: 27626379
[TBL] [Abstract][Full Text] [Related]
47. The LATERAL ORGAN BOUNDARIES Domain gene family in grapevine: genome-wide characterization and expression analyses during developmental processes and stress responses.
Grimplet J; Pimentel D; Agudelo-Romero P; Martinez-Zapater JM; Fortes AM
Sci Rep; 2017 Nov; 7(1):15968. PubMed ID: 29162903
[TBL] [Abstract][Full Text] [Related]
48. Chromatin analysis in human early development reveals epigenetic transition during ZGA.
Wu J; Xu J; Liu B; Yao G; Wang P; Lin Z; Huang B; Wang X; Li T; Shi S; Zhang N; Duan F; Ming J; Zhang X; Niu W; Song W; Jin H; Guo Y; Dai S; Hu L; Fang L; Wang Q; Li Y; Li W; Na J; Xie W; Sun Y
Nature; 2018 May; 557(7704):256-260. PubMed ID: 29720659
[TBL] [Abstract][Full Text] [Related]
49. Specific chromatin changes mark lateral organ founder cells in the Arabidopsis inflorescence meristem.
Frerichs A; Engelhorn J; Altmüller J; Gutierrez-Marcos J; Werr W
J Exp Bot; 2019 Aug; 70(15):3867-3879. PubMed ID: 31037302
[TBL] [Abstract][Full Text] [Related]
50. ATAC-Seq Data for Genome-Wide Profiling of Transcription Factor Binding Sites in the Rice False Smut Fungus
Chen X; Liu H; Chen X; Huang J; Hsiang T; Zheng L
Mol Plant Microbe Interact; 2021 Jul; 34(7):830-834. PubMed ID: 33555221
[TBL] [Abstract][Full Text] [Related]
51. Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information.
Korkuc P; Schippers JH; Walther D
Plant Physiol; 2014 Jan; 164(1):181-200. PubMed ID: 24204023
[TBL] [Abstract][Full Text] [Related]
52. The prevalence, evolution and chromatin signatures of plant regulatory elements.
Lu Z; Marand AP; Ricci WA; Ethridge CL; Zhang X; Schmitz RJ
Nat Plants; 2019 Dec; 5(12):1250-1259. PubMed ID: 31740772
[TBL] [Abstract][Full Text] [Related]
53. The gene family of dehydration responsive element-binding transcription factors in grape (Vitis vinifera): genome-wide identification and analysis, expression profiles, and involvement in abiotic stress resistance.
Zhao T; Xia H; Liu J; Ma F
Mol Biol Rep; 2014 Mar; 41(3):1577-90. PubMed ID: 24402876
[TBL] [Abstract][Full Text] [Related]
54. Combining transcription factor binding affinities with open-chromatin data for accurate gene expression prediction.
Schmidt F; Gasparoni N; Gasparoni G; Gianmoena K; Cadenas C; Polansky JK; Ebert P; Nordström K; Barann M; Sinha A; Fröhler S; Xiong J; Dehghani Amirabad A; Behjati Ardakani F; Hutter B; Zipprich G; Felder B; Eils J; Brors B; Chen W; Hengstler JG; Hamann A; Lengauer T; Rosenstiel P; Walter J; Schulz MH
Nucleic Acids Res; 2017 Jan; 45(1):54-66. PubMed ID: 27899623
[TBL] [Abstract][Full Text] [Related]
55. Perspectives on ENCODE.
; Snyder MP; Gingeras TR; Moore JE; Weng Z; Gerstein MB; Ren B; Hardison RC; Stamatoyannopoulos JA; Graveley BR; Feingold EA; Pazin MJ; Pagan M; Gilchrist DA; Hitz BC; Cherry JM; Bernstein BE; Mendenhall EM; Zerbino DR; Frankish A; Flicek P; Myers RM
Nature; 2020 Jul; 583(7818):693-698. PubMed ID: 32728248
[TBL] [Abstract][Full Text] [Related]
56. ChromaSig: a probabilistic approach to finding common chromatin signatures in the human genome.
Hon G; Ren B; Wang W
PLoS Comput Biol; 2008 Oct; 4(10):e1000201. PubMed ID: 18927605
[TBL] [Abstract][Full Text] [Related]
57. Specific chromatin landscapes and transcription factors couple breast cancer subtype with metastatic relapse to lung or brain.
Cai WL; Greer CB; Chen JF; Arnal-Estapé A; Cao J; Yan Q; Nguyen DX
BMC Med Genomics; 2020 Mar; 13(1):33. PubMed ID: 32143622
[TBL] [Abstract][Full Text] [Related]
58. The landscape of accessible chromatin in bovine oocytes and early embryos.
Ming H; Sun J; Pasquariello R; Gatenby L; Herrick JR; Yuan Y; Pinto CR; Bondioli KR; Krisher RL; Jiang Z
Epigenetics; 2021 Mar; 16(3):300-312. PubMed ID: 32663104
[TBL] [Abstract][Full Text] [Related]
59. Human-specific histone methylation signatures at transcription start sites in prefrontal neurons.
Shulha HP; Crisci JL; Reshetov D; Tushir JS; Cheung I; Bharadwaj R; Chou HJ; Houston IB; Peter CJ; Mitchell AC; Yao WD; Myers RH; Chen JF; Preuss TM; Rogaev EI; Jensen JD; Weng Z; Akbarian S
PLoS Biol; 2012; 10(11):e1001427. PubMed ID: 23185133
[TBL] [Abstract][Full Text] [Related]
60. Characterizing Genetic Regulatory Elements in Ovine Tissues.
Davenport KM; Massa AT; Bhattarai S; McKay SD; Mousel MR; Herndon MK; White SN; Cockett NE; Smith TPL; Murdoch BM;
Front Genet; 2021; 12():628849. PubMed ID: 34093640
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
