196 related articles for article (PubMed ID: 34220931)
1. Successful ATAC-Seq From Snap-Frozen Equine Tissues.
Peng S; Bellone R; Petersen JL; Kalbfleisch TS; Finno CJ
Front Genet; 2021; 12():641788. PubMed ID: 34220931
[TBL] [Abstract][Full Text] [Related]
2. Systematic alteration of ATAC-seq for profiling open chromatin in cryopreserved nuclei preparations from livestock tissues.
Halstead MM; Kern C; Saelao P; Chanthavixay G; Wang Y; Delany ME; Zhou H; Ross PJ
Sci Rep; 2020 Mar; 10(1):5230. PubMed ID: 32251359
[TBL] [Abstract][Full Text] [Related]
3. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
[TBL] [Abstract][Full Text] [Related]
4. Identification of Open Chromatin Regions in Plant Genomes Using ATAC-Seq.
Bajic M; Maher KA; Deal RB
Methods Mol Biol; 2018; 1675():183-201. PubMed ID: 29052193
[TBL] [Abstract][Full Text] [Related]
5. Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.
Henikoff S; Henikoff JG; Kaya-Okur HS; Ahmad K
Elife; 2020 Nov; 9():. PubMed ID: 33191916
[TBL] [Abstract][Full Text] [Related]
6. High-Resolution ATAC-Seq Analysis of Frozen Clinical Tissues.
Cejas P; Long HW
Methods Mol Biol; 2022; 2458():259-267. PubMed ID: 35103972
[TBL] [Abstract][Full Text] [Related]
7. [Advances in assay for transposase-accessible chromatin with high-throughput sequencing].
Wu J; Quan JP; Ye Y; Wu ZF; Yang J; Yang M; Zheng EQ
Yi Chuan; 2020 Apr; 42(4):333-346. PubMed ID: 32312702
[TBL] [Abstract][Full Text] [Related]
8. ATACgraph: Profiling Genome-Wide Chromatin Accessibility From ATAC-seq.
Lu RJ; Liu YT; Huang CW; Yen MR; Lin CY; Chen PY
Front Genet; 2020; 11():618478. PubMed ID: 33584814
[TBL] [Abstract][Full Text] [Related]
9. Functionally Annotating Regulatory Elements in the Equine Genome Using Histone Mark ChIP-Seq.
Kingsley NB; Kern C; Creppe C; Hales EN; Zhou H; Kalbfleisch TS; MacLeod JN; Petersen JL; Finno CJ; Bellone RR
Genes (Basel); 2019 Dec; 11(1):. PubMed ID: 31861495
[TBL] [Abstract][Full Text] [Related]
10. Cell type-specific chromatin accessibility analysis in the mouse and human brain.
Rocks D; Jaric I; Tesfa L; Greally JM; Suzuki M; Kundakovic M
Epigenetics; 2022; 17(2):202-219. PubMed ID: 33775205
[TBL] [Abstract][Full Text] [Related]
11. Multi-species annotation of transcriptome and chromatin structure in domesticated animals.
Foissac S; Djebali S; Munyard K; Vialaneix N; Rau A; Muret K; Esquerré D; Zytnicki M; Derrien T; Bardou P; Blanc F; Cabau C; Crisci E; Dhorne-Pollet S; Drouet F; Faraut T; Gonzalez I; Goubil A; Lacroix-Lamandé S; Laurent F; Marthey S; Marti-Marimon M; Momal-Leisenring R; Mompart F; Quéré P; Robelin D; Cristobal MS; Tosser-Klopp G; Vincent-Naulleau S; Fabre S; Pinard-Van der Laan MH; Klopp C; Tixier-Boichard M; Acloque H; Lagarrigue S; Giuffra E
BMC Biol; 2019 Dec; 17(1):108. PubMed ID: 31884969
[TBL] [Abstract][Full Text] [Related]
12. Assay for Transposase-Accessible Chromatin with High-Throughput Sequencing (ATAC-Seq) Protocol for Zebrafish Embryos.
Doganli C; Sandoval M; Thomas S; Hart D
Methods Mol Biol; 2017; 1507():59-66. PubMed ID: 27832532
[TBL] [Abstract][Full Text] [Related]
13. Mapping open chromatin by ATAC-seq in bread wheat.
Wang X; Chen C; He C; Chen D; Yan W
Front Plant Sci; 2022; 13():1074873. PubMed ID: 36466281
[TBL] [Abstract][Full Text] [Related]
14. Optimization of the Omni-ATAC protocol to chromatin accessibility profiling in snap-frozen rat adipose and muscle tissues.
Nair VD; Vasoya M; Nair V; Smith GR; Pincas H; Ge Y; Douglas CM; Esser KA; Sealfon SC
MethodsX; 2022; 9():101681. PubMed ID: 35464805
[TBL] [Abstract][Full Text] [Related]
15. Nuclei Isolation from Fresh Frozen Brain Tumors for Single-Nucleus RNA-seq and ATAC-seq.
Narayanan A; Blanco-Carmona E; Demirdizen E; Sun X; Herold-Mende C; Schlesner M; Turcan S
J Vis Exp; 2020 Aug; (162):. PubMed ID: 32925882
[TBL] [Abstract][Full Text] [Related]
16. Assay for Transposase-Accessible Chromatin Using Sequencing (ATAC-seq) Data Analysis.
Miskimen KLS; Chan ER; Haines JL
Curr Protoc Hum Genet; 2017 Jan; 92():20.4.1-20.4.13. PubMed ID: 28075484
[TBL] [Abstract][Full Text] [Related]
17. An optimized approach for multiplexing single-nuclear ATAC-seq using oligonucleotide-conjugated antibodies.
Bera BS; Thompson TV; Sosa E; Nomaru H; Reynolds D; Dubin RA; Maqbool SB; Zheng D; Morrow BE; Greally JM; Suzuki M
Epigenetics Chromatin; 2023 Apr; 16(1):14. PubMed ID: 37118773
[TBL] [Abstract][Full Text] [Related]
18. Single-Nucleus ATAC-seq for Mapping Chromatin Accessibility in Individual Cells of Murine Hearts.
Yekelchyk M; Li X; Guenther S; Braun T
Methods Mol Biol; 2024; 2752():245-257. PubMed ID: 38194039
[TBL] [Abstract][Full Text] [Related]
19. Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes.
Lu Z; Hofmeister BT; Vollmers C; DuBois RM; Schmitz RJ
Nucleic Acids Res; 2017 Apr; 45(6):e41. PubMed ID: 27903897
[TBL] [Abstract][Full Text] [Related]
20. Adipocyte-Specific ATAC-Seq with Adipose Tissues Using Fluorescence-Activated Nucleus Sorting.
Kim K; Taleb S; So J; Wann J; Cheol Roh H
J Vis Exp; 2023 Mar; (193):. PubMed ID: 37010301
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
