149 related articles for article (PubMed ID: 34235485)
1. Integrated analysis of Shank1 PDZ interactions with C-terminal and internal binding motifs.
Ali M; McAuley MM; Lüchow S; Knapp S; Joerger AC; Ivarsson Y
Curr Res Struct Biol; 2021; 3():41-50. PubMed ID: 34235485
[TBL] [Abstract][Full Text] [Related]
2. Biophysical and Structural Analyses of the Interaction between the SHANK1 PDZ Domain and an Internal SLiM.
Li Y; Trinh CH; Acevedo-Jake A; Gimenez D; Warriner SL; Wilson AJ
Biochem J; 2024 Jun; ():. PubMed ID: 38899489
[TBL] [Abstract][Full Text] [Related]
3. Discovery of short linear motif-mediated interactions through phage display of intrinsically disordered regions of the human proteome.
Davey NE; Seo MH; Yadav VK; Jeon J; Nim S; Krystkowiak I; Blikstad C; Dong D; Markova N; Kim PM; Ivarsson Y
FEBS J; 2017 Feb; 284(3):485-498. PubMed ID: 28002650
[TBL] [Abstract][Full Text] [Related]
4. Large-scale interaction profiling of PDZ domains through proteomic peptide-phage display using human and viral phage peptidomes.
Ivarsson Y; Arnold R; McLaughlin M; Nim S; Joshi R; Ray D; Liu B; Teyra J; Pawson T; Moffat J; Li SS; Sidhu SS; Kim PM
Proc Natl Acad Sci U S A; 2014 Feb; 111(7):2542-7. PubMed ID: 24550280
[TBL] [Abstract][Full Text] [Related]
5. The structural flexibility of the shank1 PDZ domain is important for its binding to different ligands.
Lee JH; Park H; Park SJ; Kim HJ; Eom SH
Biochem Biophys Res Commun; 2011 Apr; 407(1):207-12. PubMed ID: 21376703
[TBL] [Abstract][Full Text] [Related]
6. Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization.
Im YJ; Lee JH; Park SH; Park SJ; Rho SH; Kang GB; Kim E; Eom SH
J Biol Chem; 2003 Nov; 278(48):48099-104. PubMed ID: 12954649
[TBL] [Abstract][Full Text] [Related]
7. MotifAnalyzer-PDZ: A computational program to investigate the evolution of PDZ-binding target specificity.
Valgardson J; Cosbey R; Houser P; Rupp M; Van Bronkhorst R; Lee M; Jagodzinski F; Amacher JF
Protein Sci; 2019 Dec; 28(12):2127-2143. PubMed ID: 31599029
[TBL] [Abstract][Full Text] [Related]
8. Evolutionarily conserved bias of amino-acid usage refines the definition of PDZ-binding motif.
Chimura T; Launey T; Ito M
BMC Genomics; 2011 Jun; 12():300. PubMed ID: 21649932
[TBL] [Abstract][Full Text] [Related]
9. Energetic determinants of internal motif recognition by PDZ domains.
Harris BZ; Hillier BJ; Lim WA
Biochemistry; 2001 May; 40(20):5921-30. PubMed ID: 11352727
[TBL] [Abstract][Full Text] [Related]
10. Cyclic peptides as non-carboxyl-terminal ligands of syntrophin PDZ domains.
Gee SH; Sekely SA; Lombardo C; Kurakin A; Froehner SC; Kay BK
J Biol Chem; 1998 Aug; 273(34):21980-7. PubMed ID: 9705339
[TBL] [Abstract][Full Text] [Related]
11. Identification of PDZ Interactions by Proteomic Peptide Phage Display.
Lüchow S; Sundell GN; Ivarsson Y
Methods Mol Biol; 2021; 2256():41-60. PubMed ID: 34014515
[TBL] [Abstract][Full Text] [Related]
12. Structure-based identification of CaMKIIα-interacting MUPP1 PDZ domains and rational design of peptide ligands to target such interaction in human fertilization.
Zhang YL; Han ZF; Sun YP
Amino Acids; 2016 Jun; 48(6):1509-21. PubMed ID: 26984442
[TBL] [Abstract][Full Text] [Related]
13. Resonance assignment of the Shank1 PDZ domain.
Sánta A; Czajlik A; Batta G; Péterfia B; Gáspári Z
Biomol NMR Assign; 2022 Apr; 16(1):121-127. PubMed ID: 35083656
[TBL] [Abstract][Full Text] [Related]
14. Structural basis for PDZ domain interactions in the post-synaptic density scaffolding protein Shank3.
Ponna SK; Ruskamo S; Myllykoski M; Keller C; Boeckers TM; Kursula P
J Neurochem; 2018 Jun; 145(6):449-463. PubMed ID: 29473168
[TBL] [Abstract][Full Text] [Related]
15. The PDLIM family of actin-associated proteins and their emerging role in membrane trafficking.
Healy MD; Collins BM
Biochem Soc Trans; 2023 Dec; 51(6):2005-2016. PubMed ID: 38095060
[TBL] [Abstract][Full Text] [Related]
16. Proteome-wide analysis of phospho-regulated PDZ domain interactions.
Sundell GN; Arnold R; Ali M; Naksukpaiboon P; Orts J; Güntert P; Chi CN; Ivarsson Y
Mol Syst Biol; 2018 Aug; 14(8):e8129. PubMed ID: 30126976
[TBL] [Abstract][Full Text] [Related]
17. Crystal structure of the second PDZ domain of SAP97 in complex with a GluR-A C-terminal peptide.
von Ossowski I; Oksanen E; von Ossowski L; Cai C; Sundberg M; Goldman A; Keinänen K
FEBS J; 2006 Nov; 273(22):5219-29. PubMed ID: 17069616
[TBL] [Abstract][Full Text] [Related]
18. Specificity and promiscuity in human glutaminase interacting protein recognition: insight from the binding of the internal and C-terminal motif.
Banerjee M; Zoetewey DL; Ovee M; Mazumder S; Petrenko VA; Samoylova TI; Mohanty S
Biochemistry; 2012 Sep; 51(35):6950-60. PubMed ID: 22876914
[TBL] [Abstract][Full Text] [Related]
19. Analysis of PDZ domain-ligand interactions using carboxyl-terminal phage display.
Fuh G; Pisabarro MT; Li Y; Quan C; Lasky LA; Sidhu SS
J Biol Chem; 2000 Jul; 275(28):21486-91. PubMed ID: 10887205
[TBL] [Abstract][Full Text] [Related]
20. Phage display can select over-hydrophobic sequences that may impair prediction of natural domain-peptide interactions.
Luck K; Travé G
Bioinformatics; 2011 Apr; 27(7):899-902. PubMed ID: 21300698
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
