374 related articles for article (PubMed ID: 34297911)
1. Transcription-mediated supercoiling regulates genome folding and loop formation.
Neguembor MV; Martin L; Castells-García Á; Gómez-García PA; Vicario C; Carnevali D; AlHaj Abed J; Granados A; Sebastian-Perez R; Sottile F; Solon J; Wu CT; Lakadamyali M; Cosma MP
Mol Cell; 2021 Aug; 81(15):3065-3081.e12. PubMed ID: 34297911
[TBL] [Abstract][Full Text] [Related]
2. Condensin II Counteracts Cohesin and RNA Polymerase II in the Establishment of 3D Chromatin Organization.
Rowley MJ; Lyu X; Rana V; Ando-Kuri M; Karns R; Bosco G; Corces VG
Cell Rep; 2019 Mar; 26(11):2890-2903.e3. PubMed ID: 30865881
[TBL] [Abstract][Full Text] [Related]
3. The Energetics and Physiological Impact of Cohesin Extrusion.
Vian L; Pękowska A; Rao SSP; Kieffer-Kwon KR; Jung S; Baranello L; Huang SC; El Khattabi L; Dose M; Pruett N; Sanborn AL; Canela A; Maman Y; Oksanen A; Resch W; Li X; Lee B; Kovalchuk AL; Tang Z; Nelson S; Di Pierro M; Cheng RR; Machol I; St Hilaire BG; Durand NC; Shamim MS; Stamenova EK; Onuchic JN; Ruan Y; Nussenzweig A; Levens D; Aiden EL; Casellas R
Cell; 2018 May; 173(5):1165-1178.e20. PubMed ID: 29706548
[TBL] [Abstract][Full Text] [Related]
4. Active transcription and epigenetic reactions synergistically regulate meso-scale genomic organization.
Kant A; Guo Z; Vinayak V; Neguembor MV; Li WS; Agrawal V; Pujadas E; Almassalha L; Backman V; Lakadamyali M; Cosma MP; Shenoy VB
Nat Commun; 2024 May; 15(1):4338. PubMed ID: 38773126
[TBL] [Abstract][Full Text] [Related]
5. DNA Supercoiling, Topoisomerases, and Cohesin: Partners in Regulating Chromatin Architecture?
Björkegren C; Baranello L
Int J Mol Sci; 2018 Mar; 19(3):. PubMed ID: 29547555
[TBL] [Abstract][Full Text] [Related]
6. Transcription-induced supercoiling as the driving force of chromatin loop extrusion during formation of TADs in interphase chromosomes.
Racko D; Benedetti F; Dorier J; Stasiak A
Nucleic Acids Res; 2018 Feb; 46(4):1648-1660. PubMed ID: 29140466
[TBL] [Abstract][Full Text] [Related]
7. Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins.
Wutz G; Várnai C; Nagasaka K; Cisneros DA; Stocsits RR; Tang W; Schoenfelder S; Jessberger G; Muhar M; Hossain MJ; Walther N; Koch B; Kueblbeck M; Ellenberg J; Zuber J; Fraser P; Peters JM
EMBO J; 2017 Dec; 36(24):3573-3599. PubMed ID: 29217591
[TBL] [Abstract][Full Text] [Related]
8. Cohesin is positioned in mammalian genomes by transcription, CTCF and Wapl.
Busslinger GA; Stocsits RR; van der Lelij P; Axelsson E; Tedeschi A; Galjart N; Peters JM
Nature; 2017 Apr; 544(7651):503-507. PubMed ID: 28424523
[TBL] [Abstract][Full Text] [Related]
9. Interplay between CTCF boundaries and a super enhancer controls cohesin extrusion trajectories and gene expression.
Vos ESM; Valdes-Quezada C; Huang Y; Allahyar A; Verstegen MJAM; Felder AK; van der Vegt F; Uijttewaal ECH; Krijger PHL; de Laat W
Mol Cell; 2021 Aug; 81(15):3082-3095.e6. PubMed ID: 34197738
[TBL] [Abstract][Full Text] [Related]
10. Regulation of cohesin-mediated chromosome folding by PDS5 in mammals.
Yu D; Chen G; Wang Y; Wang Y; Lin R; Liu N; Zhu P; Liu H; Hu T; Feng R; Feng H; Lan F; Cai J; Chen H
EMBO Rep; 2022 Nov; 23(11):e54853. PubMed ID: 36129789
[TBL] [Abstract][Full Text] [Related]
11. Genome folding through loop extrusion by SMC complexes.
Davidson IF; Peters JM
Nat Rev Mol Cell Biol; 2021 Jul; 22(7):445-464. PubMed ID: 33767413
[TBL] [Abstract][Full Text] [Related]
12. A mechanism of cohesin-dependent loop extrusion organizes zygotic genome architecture.
Gassler J; Brandão HB; Imakaev M; Flyamer IM; Ladstätter S; Bickmore WA; Peters JM; Mirny LA; Tachibana K
EMBO J; 2017 Dec; 36(24):3600-3618. PubMed ID: 29217590
[TBL] [Abstract][Full Text] [Related]
13. Attraction and disruption: how loop extrusion and compartmentalisation shape the nuclear genome.
Magnitov M; de Wit E
Curr Opin Genet Dev; 2024 Jun; 86():102194. PubMed ID: 38636335
[TBL] [Abstract][Full Text] [Related]
14. Super-resolution visualization and modeling of human chromosomal regions reveals cohesin-dependent loop structures.
Hao X; Parmar JJ; Lelandais B; Aristov A; Ouyang W; Weber C; Zimmer C
Genome Biol; 2021 May; 22(1):150. PubMed ID: 33975635
[TBL] [Abstract][Full Text] [Related]
15. CTCF as a boundary factor for cohesin-mediated loop extrusion: evidence for a multi-step mechanism.
Hansen AS
Nucleus; 2020 Dec; 11(1):132-148. PubMed ID: 32631111
[TBL] [Abstract][Full Text] [Related]
16. HDAC8 mutations in Cornelia de Lange syndrome affect the cohesin acetylation cycle.
Deardorff MA; Bando M; Nakato R; Watrin E; Itoh T; Minamino M; Saitoh K; Komata M; Katou Y; Clark D; Cole KE; De Baere E; Decroos C; Di Donato N; Ernst S; Francey LJ; Gyftodimou Y; Hirashima K; Hullings M; Ishikawa Y; Jaulin C; Kaur M; Kiyono T; Lombardi PM; Magnaghi-Jaulin L; Mortier GR; Nozaki N; Petersen MB; Seimiya H; Siu VM; Suzuki Y; Takagaki K; Wilde JJ; Willems PJ; Prigent C; Gillessen-Kaesbach G; Christianson DW; Kaiser FJ; Jackson LG; Hirota T; Krantz ID; Shirahige K
Nature; 2012 Sep; 489(7415):313-7. PubMed ID: 22885700
[TBL] [Abstract][Full Text] [Related]
17. On the choreography of genome folding: A grand pas de deux of cohesin and CTCF.
van Ruiten MS; Rowland BD
Curr Opin Cell Biol; 2021 Jun; 70():84-90. PubMed ID: 33545664
[TBL] [Abstract][Full Text] [Related]
18. Cohesin residency determines chromatin loop patterns.
Costantino L; Hsieh TS; Lamothe R; Darzacq X; Koshland D
Elife; 2020 Nov; 9():. PubMed ID: 33170773
[TBL] [Abstract][Full Text] [Related]
19. Cohesion and cohesin-dependent chromatin organization.
Nishiyama T
Curr Opin Cell Biol; 2019 Jun; 58():8-14. PubMed ID: 30544080
[TBL] [Abstract][Full Text] [Related]
20. Mediator and cohesin connect gene expression and chromatin architecture.
Kagey MH; Newman JJ; Bilodeau S; Zhan Y; Orlando DA; van Berkum NL; Ebmeier CC; Goossens J; Rahl PB; Levine SS; Taatjes DJ; Dekker J; Young RA
Nature; 2010 Sep; 467(7314):430-5. PubMed ID: 20720539
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
