These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
140 related articles for article (PubMed ID: 34303324)
1. On the border of the amyloidogenic sequences: prefix analysis of the parallel beta sheets in the PDB_Amyloid collection. Takács K; Grolmusz V J Integr Bioinform; 2021 Jul; 19(1):. PubMed ID: 34303324 [TBL] [Abstract][Full Text] [Related]
2. PDB_Amyloid: an extended live amyloid structure list from the PDB. Takács K; Varga B; Grolmusz V FEBS Open Bio; 2019 Jan; 9(1):185-190. PubMed ID: 30652085 [TBL] [Abstract][Full Text] [Related]
3. Opening Amyloid-Windows to the secondary structure of proteins: The amyloidogenecity increases tenfold inside beta-sheets. Takács K; Varga B; Farkas V; Perczel A; Grolmusz V Comput Biol Med; 2024 Sep; 179():108863. PubMed ID: 39024903 [TBL] [Abstract][Full Text] [Related]
4. CPAD, Curated Protein Aggregation Database: A Repository of Manually Curated Experimental Data on Protein and Peptide Aggregation. Thangakani AM; Nagarajan R; Kumar S; Sakthivel R; Velmurugan D; Gromiha MM PLoS One; 2016; 11(4):e0152949. PubMed ID: 27043825 [TBL] [Abstract][Full Text] [Related]
5. MPID-T: database for sequence-structure-function information on T-cell receptor/peptide/MHC interactions. Tong JC; Kong L; Tan TW; Ranganathan S Appl Bioinformatics; 2006; 5(2):111-4. PubMed ID: 16722775 [TBL] [Abstract][Full Text] [Related]
6. Amyloid peptides and proteins in review. Harrison RS; Sharpe PC; Singh Y; Fairlie DP Rev Physiol Biochem Pharmacol; 2007; 159():1-77. PubMed ID: 17846922 [TBL] [Abstract][Full Text] [Related]
7. AmyPro: a database of proteins with validated amyloidogenic regions. Varadi M; De Baets G; Vranken WF; Tompa P; Pancsa R Nucleic Acids Res; 2018 Jan; 46(D1):D387-D392. PubMed ID: 29040693 [TBL] [Abstract][Full Text] [Related]
8. PDB-Explorer: a web-based interactive map of the protein data bank in shape space. Jin X; Awale M; Zasso M; Kostro D; Patiny L; Reymond JL BMC Bioinformatics; 2015 Oct; 16():339. PubMed ID: 26493835 [TBL] [Abstract][Full Text] [Related]
9. PDB-2-PBv3.0: An updated protein block database. Karuppasamy MP; Venkateswaran S; Subbiah P J Bioinform Comput Biol; 2020 Apr; 18(2):2050009. PubMed ID: 32404014 [TBL] [Abstract][Full Text] [Related]
10. Elucidating the Structures of Amyloid Oligomers with Macrocyclic β-Hairpin Peptides: Insights into Alzheimer's Disease and Other Amyloid Diseases. Kreutzer AG; Nowick JS Acc Chem Res; 2018 Mar; 51(3):706-718. PubMed ID: 29508987 [TBL] [Abstract][Full Text] [Related]
11. Mapping PDB chains to UniProtKB entries. Martin AC Bioinformatics; 2005 Dec; 21(23):4297-301. PubMed ID: 16188924 [TBL] [Abstract][Full Text] [Related]
12. Intrinsic disorder in the Protein Data Bank. Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849 [TBL] [Abstract][Full Text] [Related]
13. PDB-BRE: A ligand-protein interaction binding residue extractor based on Protein Data Bank. Chen S; Yan K; Liu B Proteins; 2024 Jan; 92(1):145-153. PubMed ID: 37750380 [TBL] [Abstract][Full Text] [Related]
14. Nanostructure and stability of calcitonin amyloids. Rigoldi F; Metrangolo P; Redaelli A; Gautieri A J Biol Chem; 2017 May; 292(18):7348-7357. PubMed ID: 28283568 [TBL] [Abstract][Full Text] [Related]
15. Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets. Soriaga AB; Sangwan S; Macdonald R; Sawaya MR; Eisenberg D J Phys Chem B; 2016 Jul; 120(26):5810-6. PubMed ID: 26629790 [TBL] [Abstract][Full Text] [Related]
17. Quantitative determination of the topological propensities of amyloidogenic peptides. Shi Y; Stouten PF; Pillalamarri N; Barile L; Rosal RV; Teichberg S; Bu Z; Callaway DJ Biophys Chem; 2006 Mar; 120(1):55-61. PubMed ID: 16288953 [TBL] [Abstract][Full Text] [Related]
18. A 3D sequence-independent representation of the protein data bank. Fischer D; Tsai CJ; Nussinov R; Wolfson H Protein Eng; 1995 Oct; 8(10):981-97. PubMed ID: 8771179 [TBL] [Abstract][Full Text] [Related]
19. Building a structured PDB: the RS-PDB database. Szabadka Z; Grolmusz V Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5755-8. PubMed ID: 17945915 [TBL] [Abstract][Full Text] [Related]
20. Automatic rebuilding and optimization of crystallographic structures in the Protein Data Bank. Joosten RP; Joosten K; Cohen SX; Vriend G; Perrakis A Bioinformatics; 2011 Dec; 27(24):3392-8. PubMed ID: 22034521 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]