These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

275 related articles for article (PubMed ID: 34330336)

  • 21.
    Tadrent N; Dedeine F; Hervé V
    F1000Res; 2022; 11():1522. PubMed ID: 36875992
    [No Abstract]   [Full Text] [Related]  

  • 22. Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces.
    Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
    BMC Genomics; 2021 May; 22(1):330. PubMed ID: 33957869
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4.
    Blanco-Míguez A; Beghini F; Cumbo F; McIver LJ; Thompson KN; Zolfo M; Manghi P; Dubois L; Huang KD; Thomas AM; Nickols WA; Piccinno G; Piperni E; Punčochář M; Valles-Colomer M; Tett A; Giordano F; Davies R; Wolf J; Berry SE; Spector TD; Franzosa EA; Pasolli E; Asnicar F; Huttenhower C; Segata N
    Nat Biotechnol; 2023 Nov; 41(11):1633-1644. PubMed ID: 36823356
    [TBL] [Abstract][Full Text] [Related]  

  • 24. VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data.
    Ren J; Ahlgren NA; Lu YY; Fuhrman JA; Sun F
    Microbiome; 2017 Jul; 5(1):69. PubMed ID: 28683828
    [TBL] [Abstract][Full Text] [Related]  

  • 25. A comprehensive investigation of metagenome assembly by linked-read sequencing.
    Zhang L; Fang X; Liao H; Zhang Z; Zhou X; Han L; Chen Y; Qiu Q; Li SC
    Microbiome; 2020 Nov; 8(1):156. PubMed ID: 33176883
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Comprehensive mouse microbiota genome catalog reveals major difference to its human counterpart.
    Kieser S; Zdobnov EM; Trajkovski M
    PLoS Comput Biol; 2022 Mar; 18(3):e1009947. PubMed ID: 35259160
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Computational prediction of CRISPR cassettes in gut metagenome samples from Chinese type-2 diabetic patients and healthy controls.
    Mangericao TC; Peng Z; Zhang X
    BMC Syst Biol; 2016 Jan; 10 Suppl 1(Suppl 1):5. PubMed ID: 26818725
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Joint Analysis of Long and Short Reads Enables Accurate Estimates of Microbiome Complexity.
    Bankevich A; Pevzner PA
    Cell Syst; 2018 Aug; 7(2):192-200.e3. PubMed ID: 30056005
    [TBL] [Abstract][Full Text] [Related]  

  • 29. GMrepo: a database of curated and consistently annotated human gut metagenomes.
    Wu S; Sun C; Li Y; Wang T; Jia L; Lai S; Yang Y; Luo P; Dai D; Yang YQ; Luo Q; Gao NL; Ning K; He LJ; Zhao XM; Chen WH
    Nucleic Acids Res; 2020 Jan; 48(D1):D545-D553. PubMed ID: 31504765
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Cross-linkage between bacterial taxonomy and gene functions: a study of metagenome-assembled genomes of gut microbiota in adult non-alcoholic fatty liver disease.
    Canivet CM; David N; Pailhoriès H; Briand M; Guy CD; Bouchez O; Hunault G; Fizanne L; Lannes A; Oberti F; Fouchard I; Calès P; Diehl AM; Barret M; Boursier J
    Aliment Pharmacol Ther; 2021 Mar; 53(6):722-732. PubMed ID: 33482026
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Comprehensive discovery of CRISPR-targeted terminally redundant sequences in the human gut metagenome: Viruses, plasmids, and more.
    Sugimoto R; Nishimura L; Nguyen PT; Ito J; Parrish NF; Mori H; Kurokawa K; Nakaoka H; Inoue I
    PLoS Comput Biol; 2021 Oct; 17(10):e1009428. PubMed ID: 34673779
    [TBL] [Abstract][Full Text] [Related]  

  • 32. gutMEGA: a database of the human gut MEtaGenome Atlas.
    Zhang Q; Yu K; Li S; Zhang X; Zhao Q; Zhao X; Liu Z; Cheng H; Liu ZX; Li X
    Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32496513
    [TBL] [Abstract][Full Text] [Related]  

  • 33. metaGEM: reconstruction of genome scale metabolic models directly from metagenomes.
    Zorrilla F; Buric F; Patil KR; Zelezniak A
    Nucleic Acids Res; 2021 Dec; 49(21):e126. PubMed ID: 34614189
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Islet autoantibody seroconversion in type-1 diabetes is associated with metagenome-assembled genomes in infant gut microbiomes.
    Zhang L; Jonscher KR; Zhang Z; Xiong Y; Mueller RS; Friedman JE; Pan C
    Nat Commun; 2022 Jun; 13(1):3551. PubMed ID: 35729161
    [TBL] [Abstract][Full Text] [Related]  

  • 35. From defaults to databases: parameter and database choice dramatically impact the performance of metagenomic taxonomic classification tools.
    Wright RJ; Comeau AM; Langille MGI
    Microb Genom; 2023 Mar; 9(3):. PubMed ID: 36867161
    [TBL] [Abstract][Full Text] [Related]  

  • 36. A new metagenome binning method based on gene uniqueness.
    Kang Y; Wan C; Lu S; Fu Z; Chen AK; Lu Z
    Genes Genomics; 2020 Aug; 42(8):883-892. PubMed ID: 32506266
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes.
    Lin HH; Liao YC
    Sci Rep; 2016 Apr; 6():24175. PubMed ID: 27067514
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Metagenomes and metagenome-assembled genomes from
    Narrowe AB; Liu L; Lemons JMS; Firrman JA; Mahalak KK; Deyaert S; Baudot A; Van den Abbeele P
    Microbiol Resour Announc; 2024 Feb; 13(2):e0086223. PubMed ID: 38236043
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Loss of Novel Diversity in Human Gut Microbiota Associated with Ongoing Urbanization in China.
    Sun S; Wang H; Howard AG; Zhang J; Su C; Wang Z; Du S; Fodor AA; Gordon-Larsen P; Zhang B
    mSystems; 2022 Aug; 7(4):e0020022. PubMed ID: 35727019
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Alignment-free supervised classification of metagenomes by recursive SVM.
    Cui H; Zhang X
    BMC Genomics; 2013 Sep; 14():641. PubMed ID: 24053649
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 14.