BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

251 related articles for article (PubMed ID: 34337446)

  • 1. Protocol to apply spike-in ChIP-seq to capture massive histone acetylation in human cells.
    Wu D; Wang L; Huang H
    STAR Protoc; 2021 Sep; 2(3):100681. PubMed ID: 34337446
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Native internally calibrated chromatin immunoprecipitation for quantitative studies of histone post-translational modifications.
    Grzybowski AT; Shah RN; Richter WF; Ruthenburg AJ
    Nat Protoc; 2019 Dec; 14(12):3275-3302. PubMed ID: 31723301
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Quantitative Comparison of Multiple Chromatin Immunoprecipitation-Sequencing (ChIP-seq) Experiments with spikChIP.
    Blanco E; Ballaré C; Di Croce L; Aranda S
    Methods Mol Biol; 2023; 2624():55-72. PubMed ID: 36723809
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Bioinformatics Methods for ChIP-seq Histone Analysis.
    Servant N
    Methods Mol Biol; 2022; 2529():267-293. PubMed ID: 35733020
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MOWChIP-seq for low-input and multiplexed profiling of genome-wide histone modifications.
    Zhu B; Hsieh YP; Murphy TW; Zhang Q; Naler LB; Lu C
    Nat Protoc; 2019 Dec; 14(12):3366-3394. PubMed ID: 31666743
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis.
    Patten DK; Corleone G; Magnani L
    Methods Mol Biol; 2018; 1767():271-288. PubMed ID: 29524141
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A high-throughput ChIP-Seq for large-scale chromatin studies.
    Chabbert CD; Adjalley SH; Klaus B; Fritsch ES; Gupta I; Pelechano V; Steinmetz LM
    Mol Syst Biol; 2015 Jan; 11(1):777. PubMed ID: 25583149
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-wide ChIP-seq mapping and analysis reveal butyrate-induced acetylation of H3K9 and H3K27 correlated with transcription activity in bovine cells.
    Shin JH; Li RW; Gao Y; Baldwin R; Li CJ
    Funct Integr Genomics; 2012 Mar; 12(1):119-30. PubMed ID: 22249597
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.
    Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H
    Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Purification of mouse hepatic non-parenchymal cells or nuclei for use in ChIP-seq and other next-generation sequencing approaches.
    Troutman TD; Bennett H; Sakai M; Seidman JS; Heinz S; Glass CK
    STAR Protoc; 2021 Mar; 2(1):100363. PubMed ID: 33748781
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Genome-Wide Profiling of Histone Modifications with ChIP-Seq.
    Ricci WA; Levin L; Zhang X
    Methods Mol Biol; 2020; 2072():101-117. PubMed ID: 31541441
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A High-Throughput Chromatin Immunoprecipitation Sequencing Approach to Study the Role of MYC on the Epigenetic Landscape.
    Fagnocchi L; Zippo A
    Methods Mol Biol; 2021; 2318():187-208. PubMed ID: 34019291
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protocol for using heterologous spike-ins to normalize for technical variation in chromatin immunoprecipitation.
    Greulich F; Mechtidou A; Horn T; Uhlenhaut NH
    STAR Protoc; 2021 Sep; 2(3):100609. PubMed ID: 34189474
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Chromatin Immunoprecipitation Sequencing (ChIP-seq) Protocol for Small Amounts of Frozen Biobanked Cardiac Tissue.
    Pei J; van den Dungen NAM; Asselbergs FW; Mokry M; Harakalova M
    Methods Mol Biol; 2022; 2458():97-111. PubMed ID: 35103964
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Analysis of Myc Chromatin Binding by Calibrated ChIP-Seq Approach.
    Cameron DP; Kuzin V; Baranello L
    Methods Mol Biol; 2021; 2318():161-185. PubMed ID: 34019290
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Profiling Histone Methylation in Low Numbers of Cells.
    Brind'Amour J; Lorincz MC
    Methods Mol Biol; 2022; 2529():229-251. PubMed ID: 35733018
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Using ChIP-seq technology to generate high-resolution profiles of histone modifications.
    O'Geen H; Echipare L; Farnham PJ
    Methods Mol Biol; 2011; 791():265-86. PubMed ID: 21913086
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Unified Analysis of Multiple ChIP-Seq Datasets.
    Ma G; Babarinde IA; Zhuang Q; Hutchins AP
    Methods Mol Biol; 2021; 2198():451-465. PubMed ID: 32822050
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Practical Guidelines for High-Resolution Epigenomic Profiling of Nucleosomal Histones in Postmortem Human Brain Tissue.
    Kundakovic M; Jiang Y; Kavanagh DH; Dincer A; Brown L; Pothula V; Zharovsky E; Park R; Jacobov R; Magro I; Kassim B; Wiseman J; Dang K; Sieberts SK; Roussos P; Fromer M; Harris B; Lipska BK; Peters MA; Sklar P; Akbarian S
    Biol Psychiatry; 2017 Jan; 81(2):162-170. PubMed ID: 27113501
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Protocol for fractionation-assisted native ChIP (fanChIP) to capture protein-protein/DNA interactions on chromatin.
    Miyamoto R; Yokoyama A
    STAR Protoc; 2021 Jun; 2(2):100404. PubMed ID: 33855306
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.