These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

156 related articles for article (PubMed ID: 34352080)

  • 21. Orthology relations, symbolic ultrametrics, and cographs.
    Hellmuth M; Hernandez-Rosales M; Huber KT; Moulton V; Stadler PF; Wieseke N
    J Math Biol; 2013 Jan; 66(1-2):399-420. PubMed ID: 22456957
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Automatic clustering of orthologs and in-paralogs from pairwise species comparisons.
    Remm M; Storm CE; Sonnhammer EL
    J Mol Biol; 2001 Dec; 314(5):1041-52. PubMed ID: 11743721
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Ortholog Identification and Comparative Analysis of Microbial Genomes Using MBGD and RECOG.
    Uchiyama I
    Methods Mol Biol; 2017; 1611():147-168. PubMed ID: 28451978
    [TBL] [Abstract][Full Text] [Related]  

  • 24. QuartetS: a fast and accurate algorithm for large-scale orthology detection.
    Yu C; Zavaljevski N; Desai V; Reifman J
    Nucleic Acids Res; 2011 Jul; 39(13):e88. PubMed ID: 21572104
    [TBL] [Abstract][Full Text] [Related]  

  • 25. A new fast method for inferring multiple consensus trees using k-medoids.
    Tahiri N; Willems M; Makarenkov V
    BMC Evol Biol; 2018 Apr; 18(1):48. PubMed ID: 29621975
    [TBL] [Abstract][Full Text] [Related]  

  • 26. SHOOT: phylogenetic gene search and ortholog inference.
    Emms DM; Kelly S
    Genome Biol; 2022 Mar; 23(1):85. PubMed ID: 35346327
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Hemiptera phylogenomic resources: Tree-based orthology prediction and conserved exon identification.
    Owen CL; Stern DB; Hilton SK; Crandall KA
    Mol Ecol Resour; 2020 Sep; 20(5):1346-1360. PubMed ID: 32358926
    [TBL] [Abstract][Full Text] [Related]  

  • 28. MetaPhOrs: orthology and paralogy predictions from multiple phylogenetic evidence using a consistency-based confidence score.
    Pryszcz LP; Huerta-Cepas J; Gabaldón T
    Nucleic Acids Res; 2011 Mar; 39(5):e32. PubMed ID: 21149260
    [TBL] [Abstract][Full Text] [Related]  

  • 29. MultiMSOAR 2.0: an accurate tool to identify ortholog groups among multiple genomes.
    Shi G; Peng MC; Jiang T
    PLoS One; 2011; 6(6):e20892. PubMed ID: 21712981
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Broccoli: Combining Phylogenetic and Network Analyses for Orthology Assignment.
    Derelle R; Philippe H; Colbourne JK
    Mol Biol Evol; 2020 Nov; 37(11):3389-3396. PubMed ID: 32602888
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Automated ortholog inference from phylogenetic trees and calculation of orthology reliability.
    Storm CE; Sonnhammer EL
    Bioinformatics; 2002 Jan; 18(1):92-9. PubMed ID: 11836216
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Bayesian gene/species tree reconciliation and orthology analysis using MCMC.
    Arvestad L; Berglund AC; Lagergren J; Sennblad B
    Bioinformatics; 2003; 19 Suppl 1():i7-15. PubMed ID: 12855432
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Inferring orthology and paralogy.
    Altenhoff AM; Dessimoz C
    Methods Mol Biol; 2012; 855():259-79. PubMed ID: 22407712
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Assessing performance of orthology detection strategies applied to eukaryotic genomes.
    Chen F; Mackey AJ; Vermunt JK; Roos DS
    PLoS One; 2007 Apr; 2(4):e383. PubMed ID: 17440619
    [TBL] [Abstract][Full Text] [Related]  

  • 35. ORTHOSCOPE: An Automatic Web Tool for Phylogenetically Inferring Bilaterian Orthogroups with User-Selected Taxa.
    Inoue J; Satoh N
    Mol Biol Evol; 2019 Mar; 36(3):621-631. PubMed ID: 30517749
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Reconstructing protein and gene phylogenies using reconciliation and soft-clustering.
    Kuitche E; Lafond M; Ouangraoua A
    J Bioinform Comput Biol; 2017 Dec; 15(6):1740007. PubMed ID: 29169277
    [TBL] [Abstract][Full Text] [Related]  

  • 37. OrthologID: automation of genome-scale ortholog identification within a parsimony framework.
    Chiu JC; Lee EK; Egan MG; Sarkar IN; Coruzzi GM; DeSalle R
    Bioinformatics; 2006 Mar; 22(6):699-707. PubMed ID: 16410324
    [TBL] [Abstract][Full Text] [Related]  

  • 38. POInT
    Siddiqui M; Conant GC
    BMC Bioinformatics; 2023 Apr; 24(1):174. PubMed ID: 37106333
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Gene-oriented ortholog database: a functional comparison platform for orthologous loci.
    Ho MR; Chen CH; Lin WC
    Database (Oxford); 2010; 2010():baq002. PubMed ID: 20428317
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Orthologous Matrix (OMA) algorithm 2.0: more robust to asymmetric evolutionary rates and more scalable hierarchical orthologous group inference.
    Train CM; Glover NM; Gonnet GH; Altenhoff AM; Dessimoz C
    Bioinformatics; 2017 Jul; 33(14):i75-i82. PubMed ID: 28881964
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.