These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

140 related articles for article (PubMed ID: 34361104)

  • 1. Hierarchical Structure of Protein Sequence.
    Nekrasov AN; Kozmin YP; Kozyrev SV; Ziganshin RH; de Brevern AG; Anashkina AA
    Int J Mol Sci; 2021 Aug; 22(15):. PubMed ID: 34361104
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Entropy Analysis of Protein Sequences Reveals a Hierarchical Organization.
    Anashkina AA; Petrushanko IY; Ziganshin RH; Orlov YL; Nekrasov AN
    Entropy (Basel); 2021 Dec; 23(12):. PubMed ID: 34945953
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A study of a hierarchical structure of proteins and ligand binding sites of receptors using the triangular spatial relationship-based structure comparison method and development of a size-filtering feature designed for comparing different sizes of protein structures.
    Kondra S; Chen F; Chen Y; Chen Y; Collette CJ; Xu W
    Proteins; 2022 Jan; 90(1):239-257. PubMed ID: 34392570
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Efficiently Mining Recurrent Substructures from Protein Three-Dimensional Structure Graphs.
    Saidi R; Dhifli W; Maddouri M; Mephu Nguifo E
    J Comput Biol; 2019 Jun; 26(6):561-571. PubMed ID: 30517022
    [No Abstract]   [Full Text] [Related]  

  • 5. Five hierarchical levels of sequence-structure correlation in proteins.
    Bystroff C; Shao Y; Yuan X
    Appl Bioinformatics; 2004; 3(2-3):97-104. PubMed ID: 15693735
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Automatic classification of protein structures using low-dimensional structure space mappings.
    Asarnow D; Singh R
    BMC Bioinformatics; 2014; 15 Suppl 2(Suppl 2):S1. PubMed ID: 24564500
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Functional region prediction with a set of appropriate homologous sequences--an index for sequence selection by integrating structure and sequence information with spatial statistics.
    Nemoto W; Toh H
    BMC Struct Biol; 2012 May; 12():11. PubMed ID: 22643026
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protein topology recognition from secondary structure sequences: application of the hidden Markov models to the alpha class proteins.
    Di Francesco V; Garnier J; Munson PJ
    J Mol Biol; 1997 Mar; 267(2):446-63. PubMed ID: 9096237
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Local descriptors of protein structure: a systematic analysis of the sequence-structure relationship in proteins using short- and long-range interactions.
    Hvidsten TR; Kryshtafovych A; Fidelis K
    Proteins; 2009 Jun; 75(4):870-84. PubMed ID: 19025980
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A topological algorithm for identification of structural domains of proteins.
    Emmert-Streib F; Mushegian A
    BMC Bioinformatics; 2007 Jul; 8():237. PubMed ID: 17608939
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Amino acid content of beta strands and alpha helices depends on their flanking secondary structure elements.
    Khrustalev VV; Khrustaleva TA; Poboinev VV
    Biosystems; 2018 Jun; 168():45-54. PubMed ID: 29742459
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Benchmarking of TASSER in the ab initio limit.
    Borreguero JM; Skolnick J
    Proteins; 2007 Jul; 68(1):48-56. PubMed ID: 17444524
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Sequence representation and prediction of protein secondary structure for structural motifs in twilight zone proteins.
    Kurgan L; Kedarisetti KD
    Protein J; 2006 Dec; 25(7-8):463-74. PubMed ID: 17115254
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Intrinsic disorder in the Protein Data Bank.
    Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK
    J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.
    Engelen S; Trojan LA; Sacquin-Mora S; Lavery R; Carbone A
    PLoS Comput Biol; 2009 Jan; 5(1):e1000267. PubMed ID: 19165315
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Combinatorial analysis for sequence and spatial motif discovery in short sequence fragments.
    Jackups R; Liang J
    IEEE/ACM Trans Comput Biol Bioinform; 2010; 7(3):524-36. PubMed ID: 20671322
    [TBL] [Abstract][Full Text] [Related]  

  • 17. ProtoMap: automatic classification of protein sequences, a hierarchy of protein families, and local maps of the protein space.
    Yona G; Linial N; Linial M
    Proteins; 1999 Nov; 37(3):360-78. PubMed ID: 10591097
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Local structure-based sequence profile database for local and global protein structure predictions.
    Yang AS; Wang LY
    Bioinformatics; 2002 Dec; 18(12):1650-7. PubMed ID: 12490450
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Mining super-secondary structure motifs from 3d protein structures: a sequence order independent approach.
    Aung Z; Li J
    Genome Inform; 2007; 19():15-26. PubMed ID: 18546501
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computing motif correlations in proteins.
    Horng JT; Huang HD; Wang SH; Chen MY; Huang SL; Hwang JK
    J Comput Chem; 2003 Dec; 24(16):2032-43. PubMed ID: 14531057
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.