These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

202 related articles for article (PubMed ID: 34373457)

  • 41. Urine Proteomics: Evaluation of Different Sample Preparation Workflows for Quantitative, Reproducible, and Improved Depth of Analysis.
    Ding H; Fazelinia H; Spruce LA; Weiss DA; Zderic SA; Seeholzer SH
    J Proteome Res; 2020 Apr; 19(4):1857-1862. PubMed ID: 32129078
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob.
    Goeminne LJE; Gevaert K; Clement L
    J Proteomics; 2018 Jan; 171():23-36. PubMed ID: 28391044
    [TBL] [Abstract][Full Text] [Related]  

  • 43. Quantification of Changes in Protein Expression Using SWATH Proteomics.
    Braccia C; Liessi N; Armirotti A
    Methods Mol Biol; 2021; 2361():75-94. PubMed ID: 34236656
    [TBL] [Abstract][Full Text] [Related]  

  • 44. A fast workflow for identification and quantification of proteomes.
    Ding C; Jiang J; Wei J; Liu W; Zhang W; Liu M; Fu T; Lu T; Song L; Ying W; Chang C; Zhang Y; Ma J; Wei L; Malovannaya A; Jia L; Zhen B; Wang Y; He F; Qian X; Qin J
    Mol Cell Proteomics; 2013 Aug; 12(8):2370-80. PubMed ID: 23669031
    [TBL] [Abstract][Full Text] [Related]  

  • 45. In-depth evaluation of software tools for data-independent acquisition based label-free quantification.
    Kuharev J; Navarro P; Distler U; Jahn O; Tenzer S
    Proteomics; 2015 Sep; 15(18):3140-51. PubMed ID: 25545627
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Ultra-High-Resolution IonStar Strategy Enhancing Accuracy and Precision of MS1-Based Proteomics and an Extensive Comparison with State-of-the-Art SWATH-MS in Large-Cohort Quantification.
    Wang X; Jin L; Hu C; Shen S; Qian S; Ma M; Zhu X; Li F; Wang J; Tian Y; Qu J
    Anal Chem; 2021 Mar; 93(11):4884-4893. PubMed ID: 33687211
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Repeat-Enhancing Featured Ion-Guided Stoichiometry for Identification and Quantification of Direct Infusion Proteome.
    Tang R; Dai G; Li Q; Fang Y; Zheng H; Zeng R
    J Proteome Res; 2023 Jun; 22(6):1947-1958. PubMed ID: 37194982
    [TBL] [Abstract][Full Text] [Related]  

  • 48. GproDIA enables data-independent acquisition glycoproteomics with comprehensive statistical control.
    Yang Y; Yan G; Kong S; Wu M; Yang P; Cao W; Qiao L
    Nat Commun; 2021 Oct; 12(1):6073. PubMed ID: 34663801
    [TBL] [Abstract][Full Text] [Related]  

  • 49. An automated proteomic data analysis workflow for mass spectrometry.
    Pendarvis K; Kumar R; Burgess SC; Nanduri B
    BMC Bioinformatics; 2009 Oct; 10 Suppl 11(Suppl 11):S17. PubMed ID: 19811682
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Detecting differential protein expression in large-scale population proteomics.
    Ryu SY; Qian WJ; Camp DG; Smith RD; Tompkins RG; Davis RW; Xiao W
    Bioinformatics; 2014 Oct; 30(19):2741-6. PubMed ID: 24928210
    [TBL] [Abstract][Full Text] [Related]  

  • 51. A comprehensive evaluation of popular proteomics software workflows for label-free proteome quantification and imputation.
    Välikangas T; Suomi T; Elo LL
    Brief Bioinform; 2018 Nov; 19(6):1344-1355. PubMed ID: 28575146
    [TBL] [Abstract][Full Text] [Related]  

  • 52. An Adaptive Pipeline To Maximize Isobaric Tagging Data in Large-Scale MS-Based Proteomics.
    Corthésy J; Theofilatos K; Mavroudi S; Macron C; Cominetti O; Remlawi M; Ferraro F; Núñez Galindo A; Kussmann M; Likothanassis S; Dayon L
    J Proteome Res; 2018 Jun; 17(6):2165-2173. PubMed ID: 29695160
    [TBL] [Abstract][Full Text] [Related]  

  • 53. What is targeted proteomics? A concise revision of targeted acquisition and targeted data analysis in mass spectrometry.
    Borràs E; Sabidó E
    Proteomics; 2017 Sep; 17(17-18):. PubMed ID: 28719092
    [TBL] [Abstract][Full Text] [Related]  

  • 54. A Review on Quantitative Multiplexed Proteomics.
    Pappireddi N; Martin L; Wühr M
    Chembiochem; 2019 May; 20(10):1210-1224. PubMed ID: 30609196
    [TBL] [Abstract][Full Text] [Related]  

  • 55. MSLibrarian: Optimized Predicted Spectral Libraries for Data-Independent Acquisition Proteomics.
    Isaksson M; Karlsson C; Laurell T; Kirkeby A; Heusel M
    J Proteome Res; 2022 Feb; 21(2):535-546. PubMed ID: 35042333
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
    Brusniak MY; Bodenmiller B; Campbell D; Cooke K; Eddes J; Garbutt A; Lau H; Letarte S; Mueller LN; Sharma V; Vitek O; Zhang N; Aebersold R; Watts JD
    BMC Bioinformatics; 2008 Dec; 9():542. PubMed ID: 19087345
    [TBL] [Abstract][Full Text] [Related]  

  • 57. Trypsin catalyzed 16O-to-18O exchange for comparative proteomics: tandem mass spectrometry comparison using MALDI-TOF, ESI-QTOF, and ESI-ion trap mass spectrometers.
    Heller M; Mattou H; Menzel C; Yao X
    J Am Soc Mass Spectrom; 2003 Jul; 14(7):704-18. PubMed ID: 12837592
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Optimizing single cell proteomics using trapped ion mobility spectrometry for label-free experiments.
    Mun DG; Bhat FA; Ding H; Madden BJ; Natesampillai S; Badley AD; Johnson KL; Kelly RT; Pandey A
    Analyst; 2023 Jul; 148(15):3466-3475. PubMed ID: 37395315
    [TBL] [Abstract][Full Text] [Related]  

  • 59. A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients.
    Bekker-Jensen DB; Martínez-Val A; Steigerwald S; Rüther P; Fort KL; Arrey TN; Harder A; Makarov A; Olsen JV
    Mol Cell Proteomics; 2020 Apr; 19(4):716-729. PubMed ID: 32051234
    [TBL] [Abstract][Full Text] [Related]  

  • 60. BoxCar and Library-Free Data-Independent Acquisition Substantially Improve the Depth, Range, and Completeness of Label-Free Quantitative Proteomics.
    Mehta D; Scandola S; Uhrig RG
    Anal Chem; 2022 Jan; 94(2):793-802. PubMed ID: 34978796
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.