Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 34389629)

  • 1. Transcriptome-wide
    Devall MAM; Drew DA; Dampier CH; Plummer SJ; Eaton S; Bryant J; Díez-Obrero V; Mo J; Kedrin D; Zerjav DC; Takacsi-Nagy O; Jennelle LT; Ali MW; Yilmaz ÖH; Moreno V; Powell SM; Chan AT; Peters U; Casey G
    Cancer Prev Res (Phila); 2021 Dec; 14(12):1089-1100. PubMed ID: 34389629
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Transcriptomic Response to Calcium in Normal Colon Organoids is Impacted by Colon Location and Sex.
    Devall MAM; Dampier CH; Eaton S; Ali MW; Plummer SJ; Bryant J; Gauderman WJ; Peters U; Powell SM; Casey G
    Cancer Prev Res (Phila); 2022 Oct; 15(10):679-688. PubMed ID: 36095330
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Genomic and epigenomic responses to aspirin in human colonic organoids.
    Witonsky D; Bielski MC; Li J; Lawrence KM; Mendoza IN; Usman H; Kupfer SS
    Physiol Genomics; 2023 Mar; 55(3):101-112. PubMed ID: 36645669
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Novel insights into the molecular mechanisms underlying risk of colorectal cancer from smoking and red/processed meat carcinogens by modeling exposure in normal colon organoids.
    Devall M; Dampier CH; Eaton S; Ali MW; Díez-Obrero V; Moratalla-Navarro F; Bryant J; Jennelle LT; Moreno V; Powell SM; Peters U; Casey G
    Oncotarget; 2021 Sep; 12(19):1863-1877. PubMed ID: 34548904
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Ethanol exposure drives colon location specific cell composition changes in a normal colon crypt 3D organoid model.
    Devall M; Plummer SJ; Bryant J; Jennelle LT; Eaton S; Dampier CH; Huyghe JR; Peters U; Powell SM; Casey G
    Sci Rep; 2021 Jan; 11(1):432. PubMed ID: 33432071
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Drivers of transcriptional variance in human intestinal epithelial organoids.
    Criss ZK; Bhasin N; Di Rienzi SC; Rajan A; Deans-Fielder K; Swaminathan G; Kamyabi N; Zeng XL; Doddapaneni H; Menon VK; Chakravarti D; Estrella C; Yu X; Patil K; Petrosino JF; Fleet JC; Verzi MP; Christakos S; Helmrath MA; Arimura S; DePinho RA; Britton RA; Maresso AW; Grande-Allen KJ; Blutt SE; Crawford SE; Estes MK; Ramani S; Shroyer NF
    Physiol Genomics; 2021 Nov; 53(11):486-508. PubMed ID: 34612061
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genomic and epigenomic active vitamin D responses in human colonic organoids.
    Li J; Witonsky D; Sprague E; Alleyne D; Bielski MC; Lawrence KM; Kupfer SS
    Physiol Genomics; 2021 Jun; 53(6):235-248. PubMed ID: 33900108
    [TBL] [Abstract][Full Text] [Related]  

  • 8. New insights into the mechanisms underlying 5-fluorouracil-induced intestinal toxicity based on transcriptomic and metabolomic responses in human intestinal organoids.
    Rodrigues D; de Souza T; Coyle L; Di Piazza M; Herpers B; Ferreira S; Zhang M; Vappiani J; Sévin DC; Gabor A; Lynch A; Chung SW; Saez-Rodriguez J; Jennen DGJ; Kleinjans JCS; de Kok TM
    Arch Toxicol; 2021 Aug; 95(8):2691-2718. PubMed ID: 34151400
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Wnt-driven LARGE2 mediates laminin-adhesive O-glycosylation in human colonic epithelial cells and colorectal cancer.
    Dietinger V; García de Durango CR; Wiechmann S; Boos SL; Michl M; Neumann J; Hermeking H; Kuster B; Jung P
    Cell Commun Signal; 2020 Jun; 18(1):102. PubMed ID: 32586342
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Transcriptome-wide Sequencing Reveals Molecules and Pathways Involved in Neurofibromatosis Type I Combined With Spinal Deformities.
    Cai S; Yang Y; Jia B; Wu Z; Zhang J; Shen J; Qiu G
    Spine (Phila Pa 1976); 2020 May; 45(9):E489-E498. PubMed ID: 31770328
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Modeling the effect of prolonged ethanol exposure on global gene expression and chromatin accessibility in normal 3D colon organoids.
    Devall M; Jennelle LT; Bryant J; Bien S; Peters U; Powell S; Casey G
    PLoS One; 2020; 15(1):e0227116. PubMed ID: 31951625
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Controlling for cellular heterogeneity using single-cell deconvolution of gene expression reveals novel markers of colorectal tumors exhibiting microsatellite instability.
    Devall MAM; Casey G
    Oncotarget; 2021 Apr; 12(8):767-782. PubMed ID: 33889300
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Multi-omic analysis in normal colon organoids highlights MSH4 as a novel marker of defective mismatch repair in Lynch syndrome and microsatellite instability.
    Devall M; Ali MW; Eaton S; Weisenberger DJ; Reilley MJ; Powell SM; Li L; Casey G
    Cancer Med; 2023 Jun; 12(12):13551-13572. PubMed ID: 37162286
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DNA methylation analysis of normal colon organoids from familial adenomatous polyposis patients reveals novel insight into colon cancer development.
    Devall MA; Eaton S; Ali MW; Dampier CH; Weisenberger D; Powell SM; Li L; Casey G
    Clin Epigenetics; 2022 Aug; 14(1):104. PubMed ID: 35999641
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Personalized Proteome Profiles of Healthy and Tumor Human Colon Organoids Reveal Both Individual Diversity and Basic Features of Colorectal Cancer.
    Cristobal A; van den Toorn HWP; van de Wetering M; Clevers H; Heck AJR; Mohammed S
    Cell Rep; 2017 Jan; 18(1):263-274. PubMed ID: 28052255
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Aspirin Rescues Wnt-Driven Stem-like Phenotype in Human Intestinal Organoids and Increases the Wnt Antagonist Dickkopf-1.
    Dunbar K; Valanciute A; Lima ACS; Vinuela PF; Jamieson T; Rajasekaran V; Blackmur J; Ochocka-Fox AM; Guazzelli A; Cammareri P; Arends MJ; Sansom OJ; Myant KB; Farrington SM; Dunlop MG; Din FVN
    Cell Mol Gastroenterol Hepatol; 2021; 11(2):465-489. PubMed ID: 32971322
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Transcriptome-Wide Association Study for Inflammatory Bowel Disease Reveals Novel Candidate Susceptibility Genes in Specific Colon Subsites and Tissue Categories.
    Díez-Obrero V; Moratalla-Navarro F; Ibáñez-Sanz G; Guardiola J; Rodríguez-Moranta F; Obón-Santacana M; Díez-Villanueva A; Dampier CH; Devall M; Carreras-Torres R; Casey G; Moreno V
    J Crohns Colitis; 2022 Feb; 16(2):275-285. PubMed ID: 34286847
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Understanding the complexity of retina and pluripotent stem cell derived retinal organoids with single cell RNA sequencing: current progress, remaining challenges and future prospective.
    Zerti D; Collin J; Queen R; Cockell SJ; Lako M
    Curr Eye Res; 2020 Mar; 45(3):385-396. PubMed ID: 31794277
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Integrative analysis reveals a four-gene signature for predicting survival and immunotherapy response in colon cancer patients using bulk and single-cell RNA-seq data.
    Chai R; Zhao Y; Su Z; Liang W
    Front Oncol; 2023; 13():1277084. PubMed ID: 38023180
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Organoid cultures of early-onset colorectal cancers reveal distinct and rare genetic profiles.
    Yan HHN; Siu HC; Ho SL; Yue SSK; Gao Y; Tsui WY; Chan D; Chan AS; Wong JWH; Man AHY; Lee BCH; Chan ASY; Chan AKW; Hui HS; Cheung AKL; Law WL; Lo OSH; Yuen ST; Clevers H; Leung SY
    Gut; 2020 Dec; 69(12):2165-2179. PubMed ID: 32217638
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.