These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

397 related articles for article (PubMed ID: 34462589)

  • 1. Mapping single-cell data to reference atlases by transfer learning.
    Lotfollahi M; Naghipourfar M; Luecken MD; Khajavi M; Büttner M; Wagenstetter M; Avsec Ž; Gayoso A; Yosef N; Interlandi M; Rybakov S; Misharin AV; Theis FJ
    Nat Biotechnol; 2022 Jan; 40(1):121-130. PubMed ID: 34462589
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Biologically informed deep learning to query gene programs in single-cell atlases.
    Lotfollahi M; Rybakov S; Hrovatin K; Hediyeh-Zadeh S; Talavera-López C; Misharin AV; Theis FJ
    Nat Cell Biol; 2023 Feb; 25(2):337-350. PubMed ID: 36732632
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Efficient and precise single-cell reference atlas mapping with Symphony.
    Kang JB; Nathan A; Weinand K; Zhang F; Millard N; Rumker L; Moody DB; Korsunsky I; Raychaudhuri S
    Nat Commun; 2021 Oct; 12(1):5890. PubMed ID: 34620862
    [TBL] [Abstract][Full Text] [Related]  

  • 4. RCA2: a scalable supervised clustering algorithm that reduces batch effects in scRNA-seq data.
    Schmidt F; Ranjan B; Lin QXX; Krishnan V; Joanito I; Honardoost MA; Nawaz Z; Venkatesh PN; Tan J; Rayan NA; Ong ST; Prabhakar S
    Nucleic Acids Res; 2021 Sep; 49(15):8505-8519. PubMed ID: 34320202
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sincast: a computational framework to predict cell identities in single-cell transcriptomes using bulk atlases as references.
    Deng Y; Choi J; Lê Cao KA
    Brief Bioinform; 2022 May; 23(3):. PubMed ID: 35362513
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Single-cell reference mapping to construct and extend cell-type hierarchies.
    Michielsen L; Lotfollahi M; Strobl D; Sikkema L; Reinders MJT; Theis FJ; Mahfouz A
    NAR Genom Bioinform; 2023 Sep; 5(3):lqad070. PubMed ID: 37502708
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The future of rapid and automated single-cell data analysis using reference mapping.
    Lotfollahi M; Yuhan Hao ; Theis FJ; Satija R
    Cell; 2024 May; 187(10):2343-2358. PubMed ID: 38729109
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SIMS: A deep-learning label transfer tool for single-cell RNA sequencing analysis.
    Gonzalez-Ferrer J; Lehrer J; O'Farrell A; Paten B; Teodorescu M; Haussler D; Jonsson VD; Mostajo-Radji MA
    Cell Genom; 2024 Jun; 4(6):100581. PubMed ID: 38823397
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Rapid single cell evaluation of human disease and disorder targets using REVEAL: SingleCell™.
    Kumar N; Golhar R; Sharma KS; Holloway JL; Sarangi S; Neuhaus I; Walsh AM; Pitluk ZW
    BMC Genomics; 2021 Jan; 22(1):5. PubMed ID: 33407110
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bi-channel image registration and deep-learning segmentation (BIRDS) for efficient, versatile 3D mapping of mouse brain.
    Wang X; Zeng W; Yang X; Zhang Y; Fang C; Zeng S; Han Y; Fei P
    Elife; 2021 Jan; 10():. PubMed ID: 33459255
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space.
    Xiong L; Tian K; Li Y; Ning W; Gao X; Zhang QC
    Nat Commun; 2022 Oct; 13(1):6118. PubMed ID: 36253379
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Modeling and analyzing single-cell multimodal data with deep parametric inference.
    Hu H; Feng Z; Lin H; Zhao J; Zhang Y; Xu F; Chen L; Chen F; Ma Y; Su J; Zhao Q; Shuai J
    Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36642414
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Multi-batch single-cell comparative atlas construction by deep learning disentanglement.
    Lynch AW; Brown M; Meyer CA
    Nat Commun; 2023 Jul; 14(1):4126. PubMed ID: 37433791
    [TBL] [Abstract][Full Text] [Related]  

  • 14. scMRA: a robust deep learning method to annotate scRNA-seq data with multiple reference datasets.
    Yuan M; Chen L; Deng M
    Bioinformatics; 2022 Jan; 38(3):738-745. PubMed ID: 34623390
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Constructing and optimizing 3D atlases from 2D data with application to the developing mouse brain.
    Young DM; Fazel Darbandi S; Schwartz G; Bonzell Z; Yuruk D; Nojima M; Gole LC; Rubenstein JL; Yu W; Sanders SJ
    Elife; 2021 Feb; 10():. PubMed ID: 33570495
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Domain adaptation for supervised integration of scRNA-seq data.
    Sun Y; Qiu P
    Commun Biol; 2023 Mar; 6(1):274. PubMed ID: 36928806
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Integration and transfer learning of single-cell transcriptomes via cFIT.
    Peng M; Li Y; Wamsley B; Wei Y; Roeder K
    Proc Natl Acad Sci U S A; 2021 Mar; 118(10):. PubMed ID: 33658382
    [TBL] [Abstract][Full Text] [Related]  

  • 18. iMAP: integration of multiple single-cell datasets by adversarial paired transfer networks.
    Wang D; Hou S; Zhang L; Wang X; Liu B; Zhang Z
    Genome Biol; 2021 Feb; 22(1):63. PubMed ID: 33602306
    [TBL] [Abstract][Full Text] [Related]  

  • 19. COVID19XrayNet: A Two-Step Transfer Learning Model for the COVID-19 Detecting Problem Based on a Limited Number of Chest X-Ray Images.
    Zhang R; Guo Z; Sun Y; Lu Q; Xu Z; Yao Z; Duan M; Liu S; Ren Y; Huang L; Zhou F
    Interdiscip Sci; 2020 Dec; 12(4):555-565. PubMed ID: 32959234
    [TBL] [Abstract][Full Text] [Related]  

  • 20. High-precision registration between zebrafish brain atlases using symmetric diffeomorphic normalization.
    Marquart GD; Tabor KM; Horstick EJ; Brown M; Geoca AK; Polys NF; Nogare DD; Burgess HA
    Gigascience; 2017 Aug; 6(8):1-15. PubMed ID: 28873968
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 20.