These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 34462960)

  • 1. Modeling SARS-CoV-2 proteins in the CASP-commons experiment.
    Kryshtafovych A; Moult J; Billings WM; Della Corte D; Fidelis K; Kwon S; Olechnovič K; Seok C; Venclovas Č; Won J;
    Proteins; 2021 Dec; 89(12):1987-1996. PubMed ID: 34462960
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SARS-Cov-2 ORF3a: Mutability and function.
    Bianchi M; Borsetti A; Ciccozzi M; Pascarella S
    Int J Biol Macromol; 2021 Feb; 170():820-826. PubMed ID: 33359807
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The importance of accessory protein variants in the pathogenicity of SARS-CoV-2.
    Hassan SS; Choudhury PP; Dayhoff GW; Aljabali AAA; Uhal BD; Lundstrom K; Rezaei N; Pizzol D; Adadi P; Lal A; Soares A; Mohamed Abd El-Aziz T; Brufsky AM; Azad GK; Sherchan SP; Baetas-da-Cruz W; Takayama K; Serrano-Aroca Ã; Chauhan G; Palu G; Mishra YK; Barh D; Santana Silva RJ; Andrade BS; Azevedo V; Góes-Neto A; Bazan NG; Redwan EM; Tambuwala M; Uversky VN
    Arch Biochem Biophys; 2022 Mar; 717():109124. PubMed ID: 35085577
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Crystallographic molecular replacement using an in silico-generated search model of SARS-CoV-2 ORF8.
    Flower TG; Hurley JH
    Protein Sci; 2021 Apr; 30(4):728-734. PubMed ID: 33625752
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pathogenic perspective of missense mutations of ORF3a protein of SARS-CoV-2.
    Hassan SS; Attrish D; Ghosh S; Choudhury PP; Roy B
    Virus Res; 2021 Jul; 300():198441. PubMed ID: 33940003
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ORF8a as a viroporin in SARS-CoV-2 infection?
    Zandi M
    Cytokine Growth Factor Rev; 2021 Oct; 61():1. PubMed ID: 34362671
    [No Abstract]   [Full Text] [Related]  

  • 7. Structure and dynamics of whole-sequence homology model of ORF3a protein of SARS-CoV-2: An insight from microsecond molecular dynamics simulations.
    Akter S; Islam MJ; Ali MA; Zakaria Tashrif M; Uddin MJ; Ullah MO; Halim MA
    J Biomol Struct Dyn; 2024 Aug; 42(13):6726-6739. PubMed ID: 37528650
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural insights into SARS-CoV-2 proteins.
    Arya R; Kumari S; Pandey B; Mistry H; Bihani SC; Das A; Prashar V; Gupta GD; Panicker L; Kumar M
    J Mol Biol; 2021 Jan; 433(2):166725. PubMed ID: 33245961
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Critical assessment of methods of protein structure prediction (CASP)-Round XV.
    Kryshtafovych A; Schwede T; Topf M; Fidelis K; Moult J
    Proteins; 2023 Dec; 91(12):1539-1549. PubMed ID: 37920879
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Overview of SARS-CoV-2 genome-encoded proteins.
    Bai C; Zhong Q; Gao GF
    Sci China Life Sci; 2022 Feb; 65(2):280-294. PubMed ID: 34387838
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Unraveling the impact of ORF3a Q57H mutation on SARS-CoV-2: insights from molecular dynamics.
    Islam MJ; Alom MS; Hossain MS; Ali MA; Akter S; Islam S; Ullah MO; Halim MA
    J Biomol Struct Dyn; 2024 Nov; 42(18):9753-9766. PubMed ID: 37649361
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Effects of SARS-CoV-2 mutations on protein structures and intraviral protein-protein interactions.
    Wu S; Tian C; Liu P; Guo D; Zheng W; Huang X; Zhang Y; Liu L
    J Med Virol; 2021 Apr; 93(4):2132-2140. PubMed ID: 33090512
    [TBL] [Abstract][Full Text] [Related]  

  • 13. ReFOLD3: refinement of 3D protein models with gradual restraints based on predicted local quality and residue contacts.
    Adiyaman R; McGuffin LJ
    Nucleic Acids Res; 2021 Jul; 49(W1):W589-W596. PubMed ID: 34009387
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Evolutionary dynamics of the SARS-CoV-2 ORF8 accessory gene.
    Pereira F
    Infect Genet Evol; 2020 Nov; 85():104525. PubMed ID: 32890763
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Generalized linear models provide a measure of virulence for specific mutations in SARS-CoV-2 strains.
    Oulas A; Zanti M; Tomazou M; Zachariou M; Minadakis G; Bourdakou MM; Pavlidis P; Spyrou GM
    PLoS One; 2021; 16(1):e0238665. PubMed ID: 33497392
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ModFOLD8: accurate global and local quality estimates for 3D protein models.
    McGuffin LJ; Aldowsari FMF; Alharbi SMA; Adiyaman R
    Nucleic Acids Res; 2021 Jul; 49(W1):W425-W430. PubMed ID: 33963867
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Cryo-EM structure of SARS-CoV-2 ORF3a in lipid nanodiscs.
    Kern DM; Sorum B; Mali SS; Hoel CM; Sridharan S; Remis JP; Toso DB; Kotecha A; Bautista DM; Brohawn SG
    Nat Struct Mol Biol; 2021 Jul; 28(7):573-582. PubMed ID: 34158638
    [TBL] [Abstract][Full Text] [Related]  

  • 18. PDBsum extras: SARS-CoV-2 and AlphaFold models.
    Laskowski RA; Thornton JM
    Protein Sci; 2022 Jan; 31(1):283-289. PubMed ID: 34779073
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Similarities and differences in the conformational stability and reversibility of ORF8, an accessory protein of SARS-CoV-2, and its L84S variant.
    Ohki S; Imamura T; Higashimura Y; Matsumoto K; Mori M
    Biochem Biophys Res Commun; 2021 Jul; 563():92-97. PubMed ID: 34062392
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Nonstructural protein 7 and 8 complexes of SARS-CoV-2.
    Zhang C; Li L; He J; Chen C; Su D
    Protein Sci; 2021 Apr; 30(4):873-881. PubMed ID: 33594727
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.