BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

180 related articles for article (PubMed ID: 34473697)

  • 1. Probing T-cell response by sequence-based probabilistic modeling.
    Bravi B; Balachandran VP; Greenbaum BD; Walczak AM; Mora T; Monasson R; Cocco S
    PLoS Comput Biol; 2021 Sep; 17(9):e1009297. PubMed ID: 34473697
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A Framework for Annotation of Antigen Specificities in High-Throughput T-Cell Repertoire Sequencing Studies.
    Pogorelyy MV; Shugay M
    Front Immunol; 2019; 10():2159. PubMed ID: 31616409
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Investigation of Antigen-Specific T-Cell Receptor Clusters in Human Cancers.
    Zhang H; Liu L; Zhang J; Chen J; Ye J; Shukla S; Qiao J; Zhan X; Chen H; Wu CJ; Fu YX; Li B
    Clin Cancer Res; 2020 Mar; 26(6):1359-1371. PubMed ID: 31831563
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Exploring the pre-immune landscape of antigen-specific T cells.
    Pogorelyy MV; Fedorova AD; McLaren JE; Ladell K; Bagaev DV; Eliseev AV; Mikelov AI; Koneva AE; Zvyagin IV; Price DA; Chudakov DM; Shugay M
    Genome Med; 2018 Aug; 10(1):68. PubMed ID: 30144804
    [TBL] [Abstract][Full Text] [Related]  

  • 5. High-throughput identification of antigen-specific TCRs by TCR gene capture.
    Linnemann C; Heemskerk B; Kvistborg P; Kluin RJ; Bolotin DA; Chen X; Bresser K; Nieuwland M; Schotte R; Michels S; Gomez-Eerland R; Jahn L; Hombrink P; Legrand N; Shu CJ; Mamedov IZ; Velds A; Blank CU; Haanen JB; Turchaninova MA; Kerkhoven RM; Spits H; Hadrup SR; Heemskerk MH; Blankenstein T; Chudakov DM; Bendle GM; Schumacher TN
    Nat Med; 2013 Nov; 19(11):1534-41. PubMed ID: 24121928
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An overview of immunoinformatics approaches and databases linking T cell receptor repertoires to their antigen specificity.
    Zvyagin IV; Tsvetkov VO; Chudakov DM; Shugay M
    Immunogenetics; 2020 Feb; 72(1-2):77-84. PubMed ID: 31741011
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Tumor-Infiltrating B- and T-Cell Repertoire in Pancreatic Cancer Associated With Host and Tumor Features.
    Pineda S; López de Maturana E; Yu K; Ravoor A; Wood I; Malats N; Sirota M
    Front Immunol; 2021; 12():730746. PubMed ID: 34630409
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires.
    Gielis S; Moris P; Bittremieux W; De Neuter N; Ogunjimi B; Laukens K; Meysman P
    Front Immunol; 2019; 10():2820. PubMed ID: 31849987
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Intratumoral T-cell receptor repertoire composition predicts overall survival in patients with pancreatic ductal adenocarcinoma.
    Pothuri VS; Hogg GD; Conant L; Borcherding N; James CA; Mudd J; Williams G; Seo YD; Hawkins WG; Pillarisetty VG; DeNardo DG; Fields RC
    Oncoimmunology; 2024; 13(1):2320411. PubMed ID: 38504847
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Immune monitoring and TCR sequencing of CD4 T cells in a long term responsive patient with metastasized pancreatic ductal carcinoma treated with individualized, neoepitope-derived multipeptide vaccines: a case report.
    Sonntag K; Hashimoto H; Eyrich M; Menzel M; Schubach M; Döcker D; Battke F; Courage C; Lambertz H; Handgretinger R; Biskup S; Schilbach K
    J Transl Med; 2018 Feb; 16(1):23. PubMed ID: 29409514
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Global analysis of HLA-A2 restricted MAGE-A3 tumor antigen epitopes and corresponding TCRs in non-small cell lung cancer.
    Zhang B; Ren Z; Zhao J; Zhu Y; Huang B; Xiao C; Zhang Y; Deng J; Mao L; Tang L; Lan D; Gao L; Zhang H; Chen G; Luo OJ
    Theranostics; 2023; 13(13):4449-4468. PubMed ID: 37649599
    [No Abstract]   [Full Text] [Related]  

  • 12. High-throughput discovery of cancer-targeting TCRs.
    Bunse L; Green EW; Platten M
    Methods Enzymol; 2019; 629():401-417. PubMed ID: 31727251
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Designing meaningful continuous representations of T cell receptor sequences with deep generative models.
    Leary AY; Scott D; Gupta NT; Waite JC; Skokos D; Atwal GS; Hawkins PG
    Nat Commun; 2024 May; 15(1):4271. PubMed ID: 38769289
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Natural high-avidity T-cell receptor efficiently mediates regression of cancer/testis antigen 83 positive common solid cancers.
    Li Q; Hu W; Liao B; Song C; Li L
    J Immunother Cancer; 2022 Jul; 10(7):. PubMed ID: 35798537
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Sequence and Structural Analyses Reveal Distinct and Highly Diverse Human CD8
    Chen G; Yang X; Ko A; Sun X; Gao M; Zhang Y; Shi A; Mariuzza RA; Weng NP
    Cell Rep; 2017 Apr; 19(3):569-583. PubMed ID: 28423320
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Identifying specificity groups in the T cell receptor repertoire.
    Glanville J; Huang H; Nau A; Hatton O; Wagar LE; Rubelt F; Ji X; Han A; Krams SM; Pettus C; Haas N; Arlehamn CSL; Sette A; Boyd SD; Scriba TJ; Martinez OM; Davis MM
    Nature; 2017 Jul; 547(7661):94-98. PubMed ID: 28636589
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Ultra-efficient sequencing of T Cell receptor repertoires reveals shared responses in muscle from patients with Myositis.
    Montagne JM; Zheng XA; Pinal-Fernandez I; Milisenda JC; Christopher-Stine L; Lloyd TE; Mammen AL; Larman HB
    EBioMedicine; 2020 Sep; 59():102972. PubMed ID: 32891935
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Tracking global changes induced in the CD4 T-cell receptor repertoire by immunization with a complex antigen using short stretches of CDR3 protein sequence.
    Thomas N; Best K; Cinelli M; Reich-Zeliger S; Gal H; Shifrut E; Madi A; Friedman N; Shawe-Taylor J; Chain B
    Bioinformatics; 2014 Nov; 30(22):3181-8. PubMed ID: 25095879
    [TBL] [Abstract][Full Text] [Related]  

  • 19. PD-L1 Checkpoint Inhibition Narrows the Antigen-Specific T Cell Receptor Repertoire in Chronic Lymphocytic Choriomeningitis Virus Infection.
    Klein S; Ghersi D; Manns MP; Prinz I; Cornberg M; Kraft ARM
    J Virol; 2020 Aug; 94(18):. PubMed ID: 32641478
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Precise tracking of vaccine-responding T cell clones reveals convergent and personalized response in identical twins.
    Pogorelyy MV; Minervina AA; Touzel MP; Sycheva AL; Komech EA; Kovalenko EI; Karganova GG; Egorov ES; Komkov AY; Chudakov DM; Mamedov IZ; Mora T; Walczak AM; Lebedev YB
    Proc Natl Acad Sci U S A; 2018 Dec; 115(50):12704-12709. PubMed ID: 30459272
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.