231 related articles for article (PubMed ID: 34478440)
1. On the inference of complex phylogenetic networks by Markov Chain Monte-Carlo.
Rabier CE; Berry V; Stoltz M; Santos JD; Wang W; Glaszmann JC; Pardi F; Scornavacca C
PLoS Comput Biol; 2021 Sep; 17(9):e1008380. PubMed ID: 34478440
[TBL] [Abstract][Full Text] [Related]
2. Bayesian Inference of Reticulate Phylogenies under the Multispecies Network Coalescent.
Wen D; Yu Y; Nakhleh L
PLoS Genet; 2016 May; 12(5):e1006006. PubMed ID: 27144273
[TBL] [Abstract][Full Text] [Related]
3. Bayesian inference of phylogenetic networks from bi-allelic genetic markers.
Zhu J; Wen D; Yu Y; Meudt HM; Nakhleh L
PLoS Comput Biol; 2018 Jan; 14(1):e1005932. PubMed ID: 29320496
[TBL] [Abstract][Full Text] [Related]
4. Phylogenetic MCMC algorithms are misleading on mixtures of trees.
Mossel E; Vigoda E
Science; 2005 Sep; 309(5744):2207-9. PubMed ID: 16195459
[TBL] [Abstract][Full Text] [Related]
5. Inferring Phylogenetic Networks Using PhyloNet.
Wen D; Yu Y; Zhu J; Nakhleh L
Syst Biol; 2018 Jul; 67(4):735-740. PubMed ID: 29514307
[TBL] [Abstract][Full Text] [Related]
6. Bayesian coestimation of phylogeny and sequence alignment.
Lunter G; Miklós I; Drummond A; Jensen JL; Hein J
BMC Bioinformatics; 2005 Apr; 6():83. PubMed ID: 15804354
[TBL] [Abstract][Full Text] [Related]
7. Bayesian phylogenetics with BEAUti and the BEAST 1.7.
Drummond AJ; Suchard MA; Xie D; Rambaut A
Mol Biol Evol; 2012 Aug; 29(8):1969-73. PubMed ID: 22367748
[TBL] [Abstract][Full Text] [Related]
8. Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7.
Rambaut A; Drummond AJ; Xie D; Baele G; Suchard MA
Syst Biol; 2018 Sep; 67(5):901-904. PubMed ID: 29718447
[TBL] [Abstract][Full Text] [Related]
9. An Efficient Coalescent Epoch Model for Bayesian Phylogenetic Inference.
Bouckaert RR
Syst Biol; 2022 Oct; 71(6):1549-1560. PubMed ID: 35212733
[TBL] [Abstract][Full Text] [Related]
10. Algorithmic improvements to species delimitation and phylogeny estimation under the multispecies coalescent.
Jones G
J Math Biol; 2017 Jan; 74(1-2):447-467. PubMed ID: 27287395
[TBL] [Abstract][Full Text] [Related]
11. Unifying vertical and nonvertical evolution: a stochastic ARG-based framework.
Bloomquist EW; Suchard MA
Syst Biol; 2010 Jan; 59(1):27-41. PubMed ID: 20525618
[TBL] [Abstract][Full Text] [Related]
12. Efficient Bayesian inference under the structured coalescent.
Vaughan TG; Kühnert D; Popinga A; Welch D; Drummond AJ
Bioinformatics; 2014 Aug; 30(16):2272-9. PubMed ID: 24753484
[TBL] [Abstract][Full Text] [Related]
13. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics.
Nylander JA; Wilgenbusch JC; Warren DL; Swofford DL
Bioinformatics; 2008 Feb; 24(4):581-3. PubMed ID: 17766271
[TBL] [Abstract][Full Text] [Related]
14. Particle Gibbs sampling for Bayesian phylogenetic inference.
Wang S; Wang L
Bioinformatics; 2021 May; 37(5):642-649. PubMed ID: 33045053
[TBL] [Abstract][Full Text] [Related]
15. StarBeast3: Adaptive Parallelized Bayesian Inference under the Multispecies Coalescent.
Douglas J; Jiménez-Silva CL; Bouckaert R
Syst Biol; 2022 Jun; 71(4):901-916. PubMed ID: 35176772
[TBL] [Abstract][Full Text] [Related]
16. Efficient Bayesian Species Tree Inference under the Multispecies Coalescent.
Rannala B; Yang Z
Syst Biol; 2017 Sep; 66(5):823-842. PubMed ID: 28053140
[TBL] [Abstract][Full Text] [Related]
17. Very fast algorithms for evaluating the stability of ML and Bayesian phylogenetic trees from sequence data.
Waddell PJ; Kishino H; Ota R
Genome Inform; 2002; 13():82-92. PubMed ID: 14571377
[TBL] [Abstract][Full Text] [Related]
18. Bayesian inference of phylogeny and its impact on evolutionary biology.
Huelsenbeck JP; Ronquist F; Nielsen R; Bollback JP
Science; 2001 Dec; 294(5550):2310-4. PubMed ID: 11743192
[TBL] [Abstract][Full Text] [Related]
19. Identifiability of parameters in MCMC Bayesian inference of phylogeny.
Rannala B
Syst Biol; 2002 Oct; 51(5):754-60. PubMed ID: 12396589
[TBL] [Abstract][Full Text] [Related]
20. Scalable Bayesian phylogenetics.
Fisher AA; Hassler GW; Ji X; Baele G; Suchard MA; Lemey P
Philos Trans R Soc Lond B Biol Sci; 2022 Oct; 377(1861):20210242. PubMed ID: 35989603
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]