351 related articles for article (PubMed ID: 34478634)
1. Fast two-stage phasing of large-scale sequence data.
Browning BL; Tian X; Zhou Y; Browning SR
Am J Hum Genet; 2021 Oct; 108(10):1880-1890. PubMed ID: 34478634
[TBL] [Abstract][Full Text] [Related]
2. A combined long-range phasing and long haplotype imputation method to impute phase for SNP genotypes.
Hickey JM; Kinghorn BP; Tier B; Wilson JF; Dunstan N; van der Werf JH
Genet Sel Evol; 2011 Mar; 43(1):12. PubMed ID: 21388557
[TBL] [Abstract][Full Text] [Related]
3. Statistical phasing of 150,119 sequenced genomes in the UK Biobank.
Browning BL; Browning SR
Am J Hum Genet; 2023 Jan; 110(1):161-165. PubMed ID: 36450278
[TBL] [Abstract][Full Text] [Related]
4. EagleImp: fast and accurate genome-wide phasing and imputation in a single tool.
Wienbrandt L; Ellinghaus D
Bioinformatics; 2022 Nov; 38(22):4999-5006. PubMed ID: 36130053
[TBL] [Abstract][Full Text] [Related]
5. Benchmarking phasing software with a whole-genome sequenced cattle pedigree.
Oget-Ebrad C; Kadri NK; Moreira GCM; Karim L; Coppieters W; Georges M; Druet T
BMC Genomics; 2022 Feb; 23(1):130. PubMed ID: 35164677
[TBL] [Abstract][Full Text] [Related]
6. A comparison of different algorithms for phasing haplotypes using Holstein cattle genotypes and pedigree data.
Miar Y; Sargolzaei M; Schenkel FS
J Dairy Sci; 2017 Apr; 100(4):2837-2849. PubMed ID: 28161175
[TBL] [Abstract][Full Text] [Related]
7. Phasing quality assessment in a brown layer population through family- and population-based software.
Frioni N; Cavero D; Simianer H; Erbe M
BMC Genet; 2019 Jul; 20(1):57. PubMed ID: 31311514
[TBL] [Abstract][Full Text] [Related]
8. Strategies for imputation to whole genome sequence using a single or multi-breed reference population in cattle.
Brøndum RF; Guldbrandtsen B; Sahana G; Lund MS; Su G
BMC Genomics; 2014 Aug; 15(1):728. PubMed ID: 25164068
[TBL] [Abstract][Full Text] [Related]
9. Comparison of phasing strategies for whole human genomes.
Choi Y; Chan AP; Kirkness E; Telenti A; Schork NJ
PLoS Genet; 2018 Apr; 14(4):e1007308. PubMed ID: 29621242
[TBL] [Abstract][Full Text] [Related]
10. A strategy to improve phasing of whole-genome sequenced individuals through integration of familial information from dense genotype panels.
Faux P; Druet T
Genet Sel Evol; 2017 May; 49(1):46. PubMed ID: 28511677
[TBL] [Abstract][Full Text] [Related]
11. Accurate, scalable and integrative haplotype estimation.
Delaneau O; Zagury JF; Robinson MR; Marchini JL; Dermitzakis ET
Nat Commun; 2019 Nov; 10(1):5436. PubMed ID: 31780650
[TBL] [Abstract][Full Text] [Related]
12. Extending long-range phasing and haplotype library imputation algorithms to large and heterogeneous datasets.
Money D; Wilson D; Jenko J; Whalen A; Thorn S; Gorjanc G; Hickey JM
Genet Sel Evol; 2020 Jul; 52(1):38. PubMed ID: 32640985
[TBL] [Abstract][Full Text] [Related]
13. Simultaneous genotype calling and haplotype phasing improves genotype accuracy and reduces false-positive associations for genome-wide association studies.
Browning BL; Yu Z
Am J Hum Genet; 2009 Dec; 85(6):847-61. PubMed ID: 19931040
[TBL] [Abstract][Full Text] [Related]
14. Accurate rare variant phasing of whole-genome and whole-exome sequencing data in the UK Biobank.
Hofmeister RJ; Ribeiro DM; Rubinacci S; Delaneau O
Nat Genet; 2023 Jul; 55(7):1243-1249. PubMed ID: 37386248
[TBL] [Abstract][Full Text] [Related]
15. Fast imputation using medium or low-coverage sequence data.
VanRaden PM; Sun C; O'Connell JR
BMC Genet; 2015 Jul; 16():82. PubMed ID: 26168789
[TBL] [Abstract][Full Text] [Related]
16. HapCUT2: A Method for Phasing Genomes Using Experimental Sequence Data.
Bansal V
Methods Mol Biol; 2023; 2590():139-147. PubMed ID: 36335497
[TBL] [Abstract][Full Text] [Related]
17. Genotype phasing in populations of closely related individuals.
Hickey JM
Methods Mol Biol; 2013; 1019():381-94. PubMed ID: 23756900
[TBL] [Abstract][Full Text] [Related]
18. Detection of recombination events, haplotype reconstruction and imputation of sires using half-sib SNP genotypes.
Ferdosi MH; Kinghorn BP; van der Werf JH; Gondro C
Genet Sel Evol; 2014 Feb; 46(1):11. PubMed ID: 24495596
[TBL] [Abstract][Full Text] [Related]
19. Reference-based phasing using the Haplotype Reference Consortium panel.
Loh PR; Danecek P; Palamara PF; Fuchsberger C; A Reshef Y; K Finucane H; Schoenherr S; Forer L; McCarthy S; Abecasis GR; Durbin R; L Price A
Nat Genet; 2016 Nov; 48(11):1443-1448. PubMed ID: 27694958
[TBL] [Abstract][Full Text] [Related]
20. Fast and accurate genotype imputation in genome-wide association studies through pre-phasing.
Howie B; Fuchsberger C; Stephens M; Marchini J; Abecasis GR
Nat Genet; 2012 Jul; 44(8):955-9. PubMed ID: 22820512
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
