These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

119 related articles for article (PubMed ID: 34533560)

  • 1. Effects of electrostatic interactions on global folding and local conformational dynamics of a multidomain Y-family DNA polymerase.
    Nie QM; Sun LZ; Li HB; Chu X; Wang J
    Phys Chem Chem Phys; 2021 Sep; 23(37):20841-20847. PubMed ID: 34533560
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Investigating the trade-off between folding and function in a multidomain Y-family DNA polymerase.
    Chu X; Suo Z; Wang J
    Elife; 2020 Oct; 9():. PubMed ID: 33079059
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Dynamic conformational change regulates the protein-DNA recognition: an investigation on binding of a Y-family polymerase to its target DNA.
    Chu X; Liu F; Maxwell BA; Wang Y; Suo Z; Wang H; Han W; Wang J
    PLoS Comput Biol; 2014 Sep; 10(9):e1003804. PubMed ID: 25188490
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Snapshots of a Y-family DNA polymerase in replication: substrate-induced conformational transitions and implications for fidelity of Dpo4.
    Wong JH; Fiala KA; Suo Z; Ling H
    J Mol Biol; 2008 May; 379(2):317-30. PubMed ID: 18448122
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Investigating the Conformational Dynamics of a Y-Family DNA Polymerase during Its Folding and Binding to DNA and a Nucleotide.
    Chu X; Suo Z; Wang J
    JACS Au; 2022 Feb; 2(2):341-356. PubMed ID: 35252985
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DNA lesion alters global conformational dynamics of Y-family DNA polymerase during catalysis.
    Maxwell BA; Xu C; Suo Z
    J Biol Chem; 2012 Apr; 287(16):13040-7. PubMed ID: 22362779
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Confinement and Crowding Effects on Folding of a Multidomain Y-Family DNA Polymerase.
    Chu X; Suo Z; Wang J
    J Chem Theory Comput; 2020 Feb; 16(2):1319-1332. PubMed ID: 31972079
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Structural insight into recruitment of translesion DNA polymerase Dpo4 to sliding clamp PCNA.
    Xing G; Kirouac K; Shin YJ; Bell SD; Ling H
    Mol Microbiol; 2009 Feb; 71(3):678-91. PubMed ID: 19054331
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Increased Processivity, Misincorporation, and Nucleotide Incorporation Efficiency in Sulfolobus solfataricus Dpo4 Thumb Domain Mutants.
    Wang L; Liang C; Wu J; Liu L; Tyo KEJ
    Appl Environ Microbiol; 2017 Sep; 83(18):. PubMed ID: 28710267
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The Y-family DNA polymerase Dpo4 uses a template slippage mechanism to create single-base deletions.
    Wu Y; Wilson RC; Pata JD
    J Bacteriol; 2011 May; 193(10):2630-6. PubMed ID: 21421759
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication.
    Boudsocq F; Kokoska RJ; Plosky BS; Vaisman A; Ling H; Kunkel TA; Yang W; Woodgate R
    J Biol Chem; 2004 Jul; 279(31):32932-40. PubMed ID: 15155753
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Subtle but variable conformational rearrangements in the replication cycle of Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4) may accommodate lesion bypass.
    Wang Y; Arora K; Schlick T
    Protein Sci; 2006 Jan; 15(1):135-51. PubMed ID: 16322565
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Conformational changes during nucleotide selection by Sulfolobus solfataricus DNA polymerase Dpo4.
    Eoff RL; Sanchez-Ponce R; Guengerich FP
    J Biol Chem; 2009 Jul; 284(31):21090-9. PubMed ID: 19515847
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Kinetic analysis of correct nucleotide insertion by a Y-family DNA polymerase reveals conformational changes both prior to and following phosphodiester bond formation as detected by tryptophan fluorescence.
    Beckman JW; Wang Q; Guengerich FP
    J Biol Chem; 2008 Dec; 283(52):36711-23. PubMed ID: 18984592
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Multidomain protein solves the folding problem by multifunnel combined landscape: theoretical investigation of a Y-family DNA polymerase.
    Wang Y; Chu X; Suo Z; Wang E; Wang J
    J Am Chem Soc; 2012 Aug; 134(33):13755-64. PubMed ID: 22827444
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Investigation of Intradomain Motions of a Y-Family DNA Polymerase during Substrate Binding and Catalysis.
    Raper AT; Suo Z
    Biochemistry; 2016 Oct; 55(41):5832-5844. PubMed ID: 27685341
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Conformational dynamics of a Y-family DNA polymerase during substrate binding and catalysis as revealed by interdomain Förster resonance energy transfer.
    Maxwell BA; Xu C; Suo Z
    Biochemistry; 2014 Mar; 53(11):1768-78. PubMed ID: 24568554
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Epigenetic DNA modification N
    Du K; Zhang S; Chen W; Dai M; Xu Z; Liang T; Huang W; Ling Y; Zhang H
    Arch Biochem Biophys; 2019 Oct; 675():108120. PubMed ID: 31563510
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): an archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic poleta.
    Boudsocq F; Iwai S; Hanaoka F; Woodgate R
    Nucleic Acids Res; 2001 Nov; 29(22):4607-16. PubMed ID: 11713310
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of an unfolding intermediate for a DNA lesion bypass polymerase.
    Sherrer SM; Maxwell BA; Pack LR; Fiala KA; Fowler JD; Zhang J; Suo Z
    Chem Res Toxicol; 2012 Jul; 25(7):1531-40. PubMed ID: 22667759
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.