These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

196 related articles for article (PubMed ID: 34572544)

  • 1. Recognition Interface of the Thrombin Binding Aptamer Requires Antiparallel Topology of the Quadruplex Core.
    Svetlova J; Sardushkin M; Kolganova N; Timofeev E
    Biomolecules; 2021 Sep; 11(9):. PubMed ID: 34572544
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Alpha-Deoxyguanosine to Reshape the Alpha-Thrombin Binding Aptamer.
    Kolganova NA; Tsvetkov VB; Stomakhin AA; Surzhikov SA; Timofeev EN; Varizhuk IV
    Int J Mol Sci; 2023 May; 24(9):. PubMed ID: 37176113
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Improving the Biological Properties of Thrombin-Binding Aptamer by Incorporation of 8-Bromo-2'-Deoxyguanosine and 2'-Substituted RNA Analogues.
    Virgilio A; Benigno D; Aliberti C; Vellecco V; Bucci M; Esposito V; Galeone A
    Int J Mol Sci; 2023 Oct; 24(21):. PubMed ID: 37958511
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Manipulation of a DNA aptamer-protein binding site through arylation of internal guanine residues.
    Van Riesen AJ; Fadock KL; Deore PS; Desoky A; Manderville RA; Sowlati-Hashjin S; Wetmore SD
    Org Biomol Chem; 2018 May; 16(20):3831-3840. PubMed ID: 29745412
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Probing the Nitroindole-Modified Central Loop of Thrombin Aptamer HD1 as a Recognition Site.
    Kolganova NA; Tsvetkov VB; Smirnov IP; Timofeev EN
    Nucleic Acid Ther; 2019 Aug; 29(4):208-217. PubMed ID: 30864877
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Cation Coordination Alters the Conformation of a Thrombin-Binding G-Quadruplex DNA Aptamer That Affects Inhibition of Thrombin.
    Zavyalova E; Tagiltsev G; Reshetnikov R; Arutyunyan A; Kopylov A
    Nucleic Acid Ther; 2016 Oct; 26(5):299-308. PubMed ID: 27159247
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Optimization of fluorescent 8-heteroaryl-guanine probes for monitoring protein-mediated duplex → G-quadruplex exchange.
    Fadock KL; Manderville RA; Sharma P; Wetmore SD
    Org Biomol Chem; 2016 May; 14(19):4409-19. PubMed ID: 27040462
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Lighting Up the Thrombin-Binding Aptamer G-Quadruplex with an Internal Cyanine-Indole-Quinolinium Nucleobase Surrogate. Direct Fluorescent Intensity Readout for Thrombin Binding without Topology Switching.
    Gray MD; Deore PS; Chung AJ; Van Riesen AJ; Manderville RA; Prabhakar PS; Wetmore SD
    Bioconjug Chem; 2020 Nov; 31(11):2596-2606. PubMed ID: 33156614
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Dissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer.
    Pica A; Russo Krauss I; Merlino A; Nagatoishi S; Sugimoto N; Sica F
    FEBS J; 2013 Dec; 280(24):6581-8. PubMed ID: 24128303
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.
    Kuryavyi V; Majumdar A; Shallop A; Chernichenko N; Skripkin E; Jones R; Patel DJ
    J Mol Biol; 2001 Jun; 310(1):181-94. PubMed ID: 11419945
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The effect of l-thymidine, acyclic thymine and 8-bromoguanine on the stability of model G-quadruplex structures.
    Aviñó A; Mazzini S; Fàbrega C; Peñalver P; Gargallo R; Morales JC; Eritja R
    Biochim Biophys Acta Gen Subj; 2017 May; 1861(5 Pt B):1205-1212. PubMed ID: 27705754
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Binding mode of a cationic porphyrin to parallel and antiparallel thrombin binding aptamer G-quadruplex.
    Cho HY; Lee YA; Oh YS; Lee GJ; Jang YJ; Kim SK
    J Biomol Struct Dyn; 2020 Jun; 38(9):2686-2692. PubMed ID: 31307279
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Thermodynamics and Kinetics of Unfolding of Antiparallel G-Quadruplexes in Anti-Thrombin Aptamers.
    Spiridonova VA; Naumova YO; Nikolaeva PA; Novikova TM; Kolomijtseva GY
    Biochemistry (Mosc); 2022 Nov; 87(11):1292-1300. PubMed ID: 36509716
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Coexistence of G-quadruplex and duplex domains within the secondary structure of 31-mer DNA thrombin-binding aptamer.
    Dolinnaya NG; Yuminova AV; Spiridonova VA; Arutyunyan AM; Kopylov AM
    J Biomol Struct Dyn; 2012; 30(5):524-31. PubMed ID: 22734515
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Anomeric DNA quadruplexes.
    Kolganova NA; Varizhuk AM; Novikov RA; Florentiev VL; Pozmogova GE; Borisova OF; Shchyolkina AK; Smirnov IP; Kaluzhny DN; Timofeev EN
    Artif DNA PNA XNA; 2014; 5(2):e28422. PubMed ID: 25483931
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Interaction of water with the G-quadruplex loop contributes to the binding energy of G-quadruplex to protein.
    Nagatoishi S; Sugimoto N
    Mol Biosyst; 2012 Oct; 8(10):2766-70. PubMed ID: 22851057
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Harnessing G-tetrad scaffolds within G-quadruplex forming aptamers for fluorescence detection strategies.
    Sproviero M; Manderville RA
    Chem Commun (Camb); 2014 Mar; 50(23):3097-9. PubMed ID: 24513595
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improving Thermodynamic Stability and Anticoagulant Activity of a Thrombin Binding Aptamer by Incorporation of 8-trifluoromethyl-2'-deoxyguanosine.
    Bao HL; Ishizuka T; Yamashita A; Furukoji E; Asada Y; Xu Y
    J Med Chem; 2021 Jan; 64(1):711-718. PubMed ID: 33289557
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Light-controlled thrombin catalysis and clot formation using a photoswitchable G-quadruplex DNA aptamer.
    Ali A; Bullen GA; Cross B; Dafforn TR; Little HA; Manchester J; Peacock AFA; Tucker JHR
    Chem Commun (Camb); 2019 May; 55(39):5627-5630. PubMed ID: 31025680
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Specific loop modifications of the thrombin-binding aptamer trigger the formation of parallel structures.
    Aviñó A; Portella G; Ferreira R; Gargallo R; Mazzini S; Gabelica V; Orozco M; Eritja R
    FEBS J; 2014 Feb; 281(4):1085-99. PubMed ID: 24304855
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.