BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

145 related articles for article (PubMed ID: 34595238)

  • 21. GeneViTo: visualizing gene-product functional and structural features in genomic datasets.
    Vernikos GS; Gkogkas CG; Promponas VJ; Hamodrakas SJ
    BMC Bioinformatics; 2003 Oct; 4():53. PubMed ID: 14594459
    [TBL] [Abstract][Full Text] [Related]  

  • 22. PanWeb: A web interface for pan-genomic analysis.
    Pantoja Y; Pinheiro K; Veras A; Araújo F; Lopes de Sousa A; Guimarães LC; Silva A; Ramos RTJ
    PLoS One; 2017; 12(5):e0178154. PubMed ID: 28542514
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Pan-Genome Storage and Analysis Techniques.
    Zekic T; Holley G; Stoye J
    Methods Mol Biol; 2018; 1704():29-53. PubMed ID: 29277862
    [TBL] [Abstract][Full Text] [Related]  

  • 24. In silico identification of putative drug targets from different metabolic pathways of Aeromonas hydrophila.
    Sharma V; Gupta P; Dixit A
    In Silico Biol; 2008; 8(3-4):331-8. PubMed ID: 19032165
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Identification and characterization of putative virulence genes and gene clusters in Aeromonas hydrophila PPD134/91.
    Yu HB; Zhang YL; Lau YL; Yao F; Vilches S; Merino S; Tomas JM; Howard SP; Leung KY
    Appl Environ Microbiol; 2005 Aug; 71(8):4469-77. PubMed ID: 16085838
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Critical assessment of pan-genomic analysis of metagenome-assembled genomes.
    Li T; Yin Y
    Brief Bioinform; 2022 Nov; 23(6):. PubMed ID: 36124775
    [TBL] [Abstract][Full Text] [Related]  

  • 27. When whole-genome alignments just won't work: kSNP v2 software for alignment-free SNP discovery and phylogenetics of hundreds of microbial genomes.
    Gardner SN; Hall BG
    PLoS One; 2013; 8(12):e81760. PubMed ID: 24349125
    [TBL] [Abstract][Full Text] [Related]  

  • 28. The pan-genome of Lactobacillus reuteri strains originating from the pig gastrointestinal tract.
    Wegmann U; MacKenzie DA; Zheng J; Goesmann A; Roos S; Swarbreck D; Walter J; Crossman LC; Juge N
    BMC Genomics; 2015 Dec; 16():1023. PubMed ID: 26626322
    [TBL] [Abstract][Full Text] [Related]  

  • 29. An Asian origin of virulent Aeromonas hydrophila responsible for disease epidemics in United States-farmed catfish.
    Hossain MJ; Sun D; McGarey DJ; Wrenn S; Alexander LM; Martino ME; Xing Y; Terhune JS; Liles MR
    mBio; 2014 Jun; 5(3):e00848-14. PubMed ID: 24895303
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Optimizing the Parametrization of Homologue Classification in the Pan-Genome Computation for a Bacterial Species: Case Study Streptococcus pyogenes.
    Tantoso E; Eisenhaber B; Eisenhaber F
    Methods Mol Biol; 2022; 2449():299-324. PubMed ID: 35507269
    [TBL] [Abstract][Full Text] [Related]  

  • 31. EDGAR3.0: comparative genomics and phylogenomics on a scalable infrastructure.
    Dieckmann MA; Beyvers S; Nkouamedjo-Fankep RC; Hanel PHG; Jelonek L; Blom J; Goesmann A
    Nucleic Acids Res; 2021 Jul; 49(W1):W185-W192. PubMed ID: 33988716
    [TBL] [Abstract][Full Text] [Related]  

  • 32. ITEP: an integrated toolkit for exploration of microbial pan-genomes.
    Benedict MN; Henriksen JR; Metcalf WW; Whitaker RJ; Price ND
    BMC Genomics; 2014 Jan; 15():8. PubMed ID: 24387194
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Pan-genome diversification and recombination in Cronobacter sakazakii, an opportunistic pathogen in neonates, and insights to its xerotolerant lifestyle.
    Lee IPA; Andam CP
    BMC Microbiol; 2019 Dec; 19(1):306. PubMed ID: 31881843
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Divergent Nrf Family Proteins and MtrCAB Homologs Facilitate Extracellular Electron Transfer in Aeromonas hydrophila.
    Conley BE; Intile PJ; Bond DR; Gralnick JA
    Appl Environ Microbiol; 2018 Dec; 84(23):. PubMed ID: 30266730
    [TBL] [Abstract][Full Text] [Related]  

  • 35. G-InforBIO: integrated system for microbial genomics.
    Tanaka N; Abe T; Miyazaki S; Sugawara H
    BMC Bioinformatics; 2006 Aug; 7():368. PubMed ID: 16887044
    [TBL] [Abstract][Full Text] [Related]  

  • 36. A De-Novo Genome Analysis Pipeline (DeNoGAP) for large-scale comparative prokaryotic genomics studies.
    Thakur S; Guttman DS
    BMC Bioinformatics; 2016 Jun; 17(1):260. PubMed ID: 27363390
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Using ggtree to Visualize Data on Tree-Like Structures.
    Yu G
    Curr Protoc Bioinformatics; 2020 Mar; 69(1):e96. PubMed ID: 32162851
    [TBL] [Abstract][Full Text] [Related]  

  • 38. SoRT2: a tool for sorting genomes and reconstructing phylogenetic trees by reversals, generalized transpositions and translocations.
    Huang YL; Huang CC; Tang CY; Lu CL
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W221-7. PubMed ID: 20538651
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Testing the infinitely many genes model for the evolution of the bacterial core genome and pangenome.
    Collins RE; Higgs PG
    Mol Biol Evol; 2012 Nov; 29(11):3413-25. PubMed ID: 22752048
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Comparative genomics of Lactobacillus crispatus suggests novel mechanisms for the competitive exclusion of Gardnerella vaginalis.
    Ojala T; Kankainen M; Castro J; Cerca N; Edelman S; Westerlund-Wikström B; Paulin L; Holm L; Auvinen P
    BMC Genomics; 2014 Dec; 15():1070. PubMed ID: 25480015
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.