186 related articles for article (PubMed ID: 34613974)
21. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
Hu J; Kehr B; Reinert K
Bioinformatics; 2014 Feb; 30(4):540-8. PubMed ID: 24336806
[TBL] [Abstract][Full Text] [Related]
22. GramAlign: fast alignment driven by grammar-based phylogeny.
Russell DJ
Methods Mol Biol; 2014; 1079():171-89. PubMed ID: 24170402
[TBL] [Abstract][Full Text] [Related]
23. OXBench: a benchmark for evaluation of protein multiple sequence alignment accuracy.
Raghava GP; Searle SM; Audley PC; Barber JD; Barton GJ
BMC Bioinformatics; 2003 Oct; 4():47. PubMed ID: 14552658
[TBL] [Abstract][Full Text] [Related]
24. Protein multiple sequence alignment benchmarking through secondary structure prediction.
Le Q; Sievers F; Higgins DG
Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
[TBL] [Abstract][Full Text] [Related]
25. PASTA for proteins.
Collins K; Warnow T
Bioinformatics; 2018 Nov; 34(22):3939-3941. PubMed ID: 29931282
[TBL] [Abstract][Full Text] [Related]
26. TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences.
Hung SJ; Chen YL; Chu CH; Lee CC; Chen WL; Lin YL; Lin MC; Ho CL; Liu T
BMC Bioinformatics; 2016 Oct; 17(1):433. PubMed ID: 27782801
[TBL] [Abstract][Full Text] [Related]
27. DIALIGN: finding local similarities by multiple sequence alignment.
Morgenstern B; Frech K; Dress A; Werner T
Bioinformatics; 1998; 14(3):290-4. PubMed ID: 9614273
[TBL] [Abstract][Full Text] [Related]
28. ProbCons: Probabilistic consistency-based multiple sequence alignment.
Do CB; Mahabhashyam MS; Brudno M; Batzoglou S
Genome Res; 2005 Feb; 15(2):330-40. PubMed ID: 15687296
[TBL] [Abstract][Full Text] [Related]
29. Efficient constrained multiple sequence alignment with performance guarantee.
Chin FY; Ho NL; Lam TW; Wong PW; Chan MY
Proc IEEE Comput Soc Bioinform Conf; 2003; 2():337-46. PubMed ID: 16452809
[TBL] [Abstract][Full Text] [Related]
30. High-speed multiple sequence alignment on a reconfigurable platform.
Oliver T; Schmidt B; Maskell D; Nathan D; Clemens R
Int J Bioinform Res Appl; 2006; 2(4):394-406. PubMed ID: 18048180
[TBL] [Abstract][Full Text] [Related]
31. Probalign: multiple sequence alignment using partition function posterior probabilities.
Roshan U; Livesay DR
Bioinformatics; 2006 Nov; 22(22):2715-21. PubMed ID: 16954142
[TBL] [Abstract][Full Text] [Related]
32. CMSA: a heterogeneous CPU/GPU computing system for multiple similar RNA/DNA sequence alignment.
Chen X; Wang C; Tang S; Yu C; Zou Q
BMC Bioinformatics; 2017 Jun; 18(1):315. PubMed ID: 28646874
[TBL] [Abstract][Full Text] [Related]
33. MaxAlign: maximizing usable data in an alignment.
Gouveia-Oliveira R; Sackett PW; Pedersen AG
BMC Bioinformatics; 2007 Aug; 8():312. PubMed ID: 17725821
[TBL] [Abstract][Full Text] [Related]
34. Rapid detection, classification and accurate alignment of up to a million or more related protein sequences.
Neuwald AF
Bioinformatics; 2009 Aug; 25(15):1869-75. PubMed ID: 19505947
[TBL] [Abstract][Full Text] [Related]
35. AlignStat: a web-tool and R package for statistical comparison of alternative multiple sequence alignments.
Shafee T; Cooke I
BMC Bioinformatics; 2016 Oct; 17(1):434. PubMed ID: 27784265
[TBL] [Abstract][Full Text] [Related]
36. Evaluation of iterative alignment algorithms for multiple alignment.
Wallace IM; O'Sullivan O; Higgins DG
Bioinformatics; 2005 Apr; 21(8):1408-14. PubMed ID: 15564300
[TBL] [Abstract][Full Text] [Related]
37. SINA: accurate high-throughput multiple sequence alignment of ribosomal RNA genes.
Pruesse E; Peplies J; Glöckner FO
Bioinformatics; 2012 Jul; 28(14):1823-9. PubMed ID: 22556368
[TBL] [Abstract][Full Text] [Related]
38. A data parallel strategy for aligning multiple biological sequences on multi-core computers.
Zhu X; Li K; Salah A
Comput Biol Med; 2013 May; 43(4):350-61. PubMed ID: 23414778
[TBL] [Abstract][Full Text] [Related]
39. Finite width model sequence comparison.
Chia N; Bundschuh R
Phys Rev E Stat Nonlin Soft Matter Phys; 2004 Aug; 70(2 Pt 1):021906. PubMed ID: 15447514
[TBL] [Abstract][Full Text] [Related]
40. An efficient algorithm after ungapped analysis in BLAST.
Garg D; Saxena SC; Bhardwaj LM
DNA Seq; 2006 Aug; 17(4):247-53. PubMed ID: 17312943
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]