203 related articles for article (PubMed ID: 34625425)
1. The Mutational Signature Comprehensive Analysis Toolkit (musicatk) for the Discovery, Prediction, and Exploration of Mutational Signatures.
Chevalier A; Yang S; Khurshid Z; Sahelijo N; Tong T; Huggins JH; Yajima M; Campbell JD
Cancer Res; 2021 Dec; 81(23):5813-5817. PubMed ID: 34625425
[TBL] [Abstract][Full Text] [Related]
2. SigsPack, a package for cancer mutational signatures.
Schumann F; Blanc E; Messerschmidt C; Blankenstein T; Busse A; Beule D
BMC Bioinformatics; 2019 Sep; 20(1):450. PubMed ID: 31477009
[TBL] [Abstract][Full Text] [Related]
3.
Yang Z; Pandey P; Marjoram P; Siegmund KD
F1000Res; 2020; 9():586. PubMed ID: 33299548
[TBL] [Abstract][Full Text] [Related]
4. Analysis of mutational signatures with yet another package for signature analysis.
Hübschmann D; Jopp-Saile L; Andresen C; Krämer S; Gu Z; Heilig CE; Kreutzfeldt S; Teleanu V; Fröhling S; Eils R; Schlesner M
Genes Chromosomes Cancer; 2021 May; 60(5):314-331. PubMed ID: 33222322
[TBL] [Abstract][Full Text] [Related]
5. Analysis of Mutational Signatures Using the mutSignatures R Library.
Fantini D; Meeks JJ
Methods Mol Biol; 2023; 2684():45-57. PubMed ID: 37410227
[TBL] [Abstract][Full Text] [Related]
6. MutVis: Automated framework for analysis and visualization of mutational signatures in pathogenic bacterial strains.
Prasanna A; Niranjan V
Infect Genet Evol; 2021 Jul; 91():104805. PubMed ID: 33689914
[TBL] [Abstract][Full Text] [Related]
7. Patterns and processes of somatic mutations in nine major cancers.
Jia P; Pao W; Zhao Z
BMC Med Genomics; 2014 Feb; 7():11. PubMed ID: 24552141
[TBL] [Abstract][Full Text] [Related]
8. MutSignatures: an R package for extraction and analysis of cancer mutational signatures.
Fantini D; Vidimar V; Yu Y; Condello S; Meeks JJ
Sci Rep; 2020 Oct; 10(1):18217. PubMed ID: 33106540
[TBL] [Abstract][Full Text] [Related]
9. mmsig: a fitting approach to accurately identify somatic mutational signatures in hematological malignancies.
Rustad EH; Nadeu F; Angelopoulos N; Ziccheddu B; Bolli N; Puente XS; Campo E; Landgren O; Maura F
Commun Biol; 2021 Mar; 4(1):424. PubMed ID: 33782531
[TBL] [Abstract][Full Text] [Related]
10. mSignatureDB: a database for deciphering mutational signatures in human cancers.
Huang PJ; Chiu LY; Lee CC; Yeh YM; Huang KY; Chiu CH; Tang P
Nucleic Acids Res; 2018 Jan; 46(D1):D964-D970. PubMed ID: 29145625
[TBL] [Abstract][Full Text] [Related]
11. Computational tools to detect signatures of mutational processes in DNA from tumours: A review and empirical comparison of performance.
Omichessan H; Severi G; Perduca V
PLoS One; 2019; 14(9):e0221235. PubMed ID: 31513583
[TBL] [Abstract][Full Text] [Related]
12. MutationalPatterns: the one stop shop for the analysis of mutational processes.
Manders F; Brandsma AM; de Kanter J; Verheul M; Oka R; van Roosmalen MJ; van der Roest B; van Hoeck A; Cuppen E; van Boxtel R
BMC Genomics; 2022 Feb; 23(1):134. PubMed ID: 35168570
[TBL] [Abstract][Full Text] [Related]
13. Mutational Signatures in Cancer (MuSiCa): a web application to implement mutational signatures analysis in cancer samples.
Díaz-Gay M; Vila-Casadesús M; Franch-Expósito S; Hernández-Illán E; Lozano JJ; Castellví-Bel S
BMC Bioinformatics; 2018 Jun; 19(1):224. PubMed ID: 29898651
[TBL] [Abstract][Full Text] [Related]
14. Mutational Signatures in Cancer: Laboratory Considerations and Emerging Applications.
Dong F; Davies KD
J Mol Diagn; 2023 Nov; 25(11):790-795. PubMed ID: 37633594
[TBL] [Abstract][Full Text] [Related]
15. Accuracy of mutational signature software on correlated signatures.
Wu Y; Chua EHZ; Ng AWT; Boot A; Rozen SG
Sci Rep; 2022 Jan; 12(1):390. PubMed ID: 35013428
[TBL] [Abstract][Full Text] [Related]
16. MutSpec: a Galaxy toolbox for streamlined analyses of somatic mutation spectra in human and mouse cancer genomes.
Ardin M; Cahais V; Castells X; Bouaoun L; Byrnes G; Herceg Z; Zavadil J; Olivier M
BMC Bioinformatics; 2016 Apr; 17():170. PubMed ID: 27091472
[TBL] [Abstract][Full Text] [Related]
17. decompTumor2Sig: identification of mutational signatures active in individual tumors.
Krüger S; Piro RM
BMC Bioinformatics; 2019 Apr; 20(Suppl 4):152. PubMed ID: 30999866
[TBL] [Abstract][Full Text] [Related]
18. Clinical and genomic characterization of mutational signatures across human cancers.
Liao J; Bai J; Pan T; Zou H; Gao Y; Guo J; Xu Q; Xu J; Li Y; Li X
Int J Cancer; 2023 Apr; 152(8):1613-1629. PubMed ID: 36533638
[TBL] [Abstract][Full Text] [Related]
19. Cancer Mutational Processes Vary in Their Association with Replication Timing and Chromatin Accessibility.
Yaacov A; Vardi O; Blumenfeld B; Greenberg A; Massey DJ; Koren A; Adar S; Simon I; Rosenberg S
Cancer Res; 2021 Dec; 81(24):6106-6116. PubMed ID: 34702725
[TBL] [Abstract][Full Text] [Related]
20. Modeling clinical and molecular covariates of mutational process activity in cancer.
Robinson W; Sharan R; Leiserson MDM
Bioinformatics; 2019 Jul; 35(14):i492-i500. PubMed ID: 31510643
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]