BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 34650044)

  • 1. Direct genome-wide identification of G-quadruplex structures by whole-genome resequencing.
    Tu J; Duan M; Liu W; Lu N; Zhou Y; Sun X; Lu Z
    Nat Commun; 2021 Oct; 12(1):6014. PubMed ID: 34650044
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Identification of G-quadruplex clusters by high-throughput sequencing of whole-genome amplified products with a G-quadruplex ligand.
    Yoshida W; Saikyo H; Nakabayashi K; Yoshioka H; Bay DH; Iida K; Kawai T; Hata K; Ikebukuro K; Nagasawa K; Karube I
    Sci Rep; 2018 Feb; 8(1):3116. PubMed ID: 29449667
    [TBL] [Abstract][Full Text] [Related]  

  • 3. High-throughput sequencing of DNA G-quadruplex structures in the human genome.
    Chambers VS; Marsico G; Boutell JM; Di Antonio M; Smith GP; Balasubramanian S
    Nat Biotechnol; 2015 Aug; 33(8):877-81. PubMed ID: 26192317
    [TBL] [Abstract][Full Text] [Related]  

  • 4. G-quadruplex landscape and its regulation revealed by a new antibody capture method.
    Datta S; Patel M; Sathyaseelan C; Ghosh C; Mudgal A; Patel D; Rathinavelan T; Singh U
    Oncotarget; 2024 Mar; 15():175-198. PubMed ID: 38484151
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genome-wide mapping of endogenous G-quadruplex DNA structures by chromatin immunoprecipitation and high-throughput sequencing.
    Hänsel-Hertsch R; Spiegel J; Marsico G; Tannahill D; Balasubramanian S
    Nat Protoc; 2018 Mar; 13(3):551-564. PubMed ID: 29470465
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Production of the anti-G-quadruplex antibody BG4 for efficient genome-wide analyses: From plasmid quality control to antibody validation.
    Maurizio I; Tosoni B; Gallina I; Ruggiero E; Zanin I; Richter SN
    Methods Enzymol; 2024; 695():193-219. PubMed ID: 38521585
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genetic variations in G-quadruplex forming sequences affect the transcription of human disease-related genes.
    Lorenzatti A; Piga EJ; Gismondi M; Binolfi A; Margarit E; Calcaterra NB; Armas P
    Nucleic Acids Res; 2023 Dec; 51(22):12124-12139. PubMed ID: 37930868
    [TBL] [Abstract][Full Text] [Related]  

  • 8. G4Bank: A database of experimentally identified DNA G-quadruplex sequences.
    Zhong HS; Dong MJ; Gao F
    Interdiscip Sci; 2023 Sep; 15(3):515-523. PubMed ID: 37389723
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Stable bulged G-quadruplexes in the human genome: identification, experimental validation and functionalization.
    Papp C; Mukundan VT; Jenjaroenpun P; Winnerdy FR; Ow GS; Phan AT; Kuznetsov VA
    Nucleic Acids Res; 2023 May; 51(9):4148-4177. PubMed ID: 37094040
    [TBL] [Abstract][Full Text] [Related]  

  • 10. In Vivo Chemical Probing for G-Quadruplex Formation.
    Kouzine F; Wojtowicz D; Yamane A; Casellas R; Przytycka TM; Levens DL
    Methods Mol Biol; 2019; 2035():369-382. PubMed ID: 31444763
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Whole genome experimental maps of DNA G-quadruplexes in multiple species.
    Marsico G; Chambers VS; Sahakyan AB; McCauley P; Boutell JM; Antonio MD; Balasubramanian S
    Nucleic Acids Res; 2019 May; 47(8):3862-3874. PubMed ID: 30892612
    [TBL] [Abstract][Full Text] [Related]  

  • 12. G4mismatch: Deep neural networks to predict G-quadruplex propensity based on G4-seq data.
    Barshai M; Engel B; Haim I; Orenstein Y
    PLoS Comput Biol; 2023 Mar; 19(3):e1010948. PubMed ID: 36897885
    [TBL] [Abstract][Full Text] [Related]  

  • 13. G-quadruplex structural variations in human genome associated with single-nucleotide variations and their impact on gene activity.
    Gong JY; Wen CJ; Tang ML; Duan RF; Chen JN; Zhang JY; Zheng KW; He YD; Hao YH; Yu Q; Ren SP; Tan Z
    Proc Natl Acad Sci U S A; 2021 May; 118(21):. PubMed ID: 34001600
    [TBL] [Abstract][Full Text] [Related]  

  • 14. QUFIND: tool for comparative prediction and mining of G4 quadruplexes overlapping with CpG islands.
    Kaur B; Sharma P; Arora P; Sood V
    Front Genet; 2023; 14():1265808. PubMed ID: 37953924
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Prediction of strand-specific and cell-type-specific G-quadruplexes based on high-resolution CUT&Tag data.
    Cui Y; Liu H; Ming Y; Zhang Z; Liu L; Liu R
    Brief Funct Genomics; 2024 May; 23(3):265-275. PubMed ID: 37357985
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Re-evaluation of G-quadruplex propensity with G4Hunter.
    Bedrat A; Lacroix L; Mergny JL
    Nucleic Acids Res; 2016 Feb; 44(4):1746-59. PubMed ID: 26792894
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis of Nucleotide Variations in Human G-Quadruplex Forming Regions Associated with Disease States.
    Neupane A; Chariker JH; Rouchka EC
    Genes (Basel); 2023 Nov; 14(12):. PubMed ID: 38136947
    [TBL] [Abstract][Full Text] [Related]  

  • 18. G-Quadruplexes in the Viral Genome: Unlocking Targets for Therapeutic Interventions and Antiviral Strategies.
    Pathak R
    Viruses; 2023 Nov; 15(11):. PubMed ID: 38005893
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Deciphering RNA G-quadruplex function during the early steps of HIV-1 infection.
    Amrane S; Jaubert C; Bedrat A; Rundstadler T; Recordon-Pinson P; Aknin C; Guédin A; De Rache A; Bartolucci L; Diene I; Lemoine F; Gascuel O; Pratviel G; Mergny JL; Andreola ML
    Nucleic Acids Res; 2022 Nov; 50(21):12328-12343. PubMed ID: 36453997
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Non-duplex G-Quadruplex DNA Structure: A Developing Story from Predicted Sequences to DNA Structure-Dependent Epigenetics and Beyond.
    Sengupta A; Roy SS; Chowdhury S
    Acc Chem Res; 2021 Jan; 54(1):46-56. PubMed ID: 33347280
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.